Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nup54Q8BTS4 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nup54Q8BTS4 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nup54Q8BTS4 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.68□□□□□ -0.22
Nup54Q8BTS4 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nup54Q8BTS4 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Nup54Q8BTS4 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nup54Q8BTS4 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nup54Q8BTS4 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nup54Q8BTS4 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Nup54Q8BTS4 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nup54Q8BTS4 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nup54Q8BTS4 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.68□□□□□ -0.22
Nup54Q8BTS4 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nup54Q8BTS4 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.68□□□□□ -0.22
Nup54Q8BTS4 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nup54Q8BTS4 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.68□□□□□ -0.22
Nup54Q8BTS4 Gm8810-201ENSMUST00000172895 754 ntBASIC13.68□□□□□ -0.22
Nup54Q8BTS4 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.68□□□□□ -0.22
Nup54Q8BTS4 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.68□□□□□ -0.22
Nup54Q8BTS4 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.68□□□□□ -0.22
Nup54Q8BTS4 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC13.68□□□□□ -0.22
Nup54Q8BTS4 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nup54Q8BTS4 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nup54Q8BTS4 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nup54Q8BTS4 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nup54Q8BTS4 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.68□□□□□ -0.22
Nup54Q8BTS4 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.68□□□□□ -0.22
Nup54Q8BTS4 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.68□□□□□ -0.22
Nup54Q8BTS4 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nup54Q8BTS4 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nup54Q8BTS4 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Nup54Q8BTS4 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nup54Q8BTS4 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.68□□□□□ -0.22
Nup54Q8BTS4 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nup54Q8BTS4 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nup54Q8BTS4 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nup54Q8BTS4 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.68□□□□□ -0.22
Nup54Q8BTS4 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nup54Q8BTS4 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nup54Q8BTS4 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Nup54Q8BTS4 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nup54Q8BTS4 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nup54Q8BTS4 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nup54Q8BTS4 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nup54Q8BTS4 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.67□□□□□ -0.22
Nup54Q8BTS4 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nup54Q8BTS4 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nup54Q8BTS4 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nup54Q8BTS4 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nup54Q8BTS4 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nup54Q8BTS4 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nup54Q8BTS4 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nup54Q8BTS4 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nup54Q8BTS4 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nup54Q8BTS4 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.67□□□□□ -0.22
Nup54Q8BTS4 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Nup54Q8BTS4 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nup54Q8BTS4 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13.67□□□□□ -0.22
Nup54Q8BTS4 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Nup54Q8BTS4 Gm43433-201ENSMUST00000196573 481 ntBASIC13.67□□□□□ -0.22
Nup54Q8BTS4 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC13.67□□□□□ -0.22
Nup54Q8BTS4 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.67□□□□□ -0.22
Nup54Q8BTS4 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.67□□□□□ -0.22
Nup54Q8BTS4 Gm6091-201ENSMUST00000098307 165 ntBASIC13.67□□□□□ -0.22
Nup54Q8BTS4 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nup54Q8BTS4 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nup54Q8BTS4 Matn2-206ENSMUST00000228570 2798 ntBASIC13.67□□□□□ -0.22
Nup54Q8BTS4 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nup54Q8BTS4 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nup54Q8BTS4 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nup54Q8BTS4 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nup54Q8BTS4 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nup54Q8BTS4 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Nup54Q8BTS4 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Nup54Q8BTS4 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nup54Q8BTS4 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nup54Q8BTS4 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nup54Q8BTS4 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nup54Q8BTS4 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nup54Q8BTS4 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nup54Q8BTS4 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Nup54Q8BTS4 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nup54Q8BTS4 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Nup54Q8BTS4 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nup54Q8BTS4 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.66□□□□□ -0.22
Nup54Q8BTS4 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nup54Q8BTS4 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nup54Q8BTS4 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Nup54Q8BTS4 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nup54Q8BTS4 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Nup54Q8BTS4 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nup54Q8BTS4 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.66□□□□□ -0.22
Nup54Q8BTS4 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.66□□□□□ -0.22
Nup54Q8BTS4 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.66□□□□□ -0.22
Nup54Q8BTS4 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Nup54Q8BTS4 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.66□□□□□ -0.22
Nup54Q8BTS4 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.66□□□□□ -0.22
Nup54Q8BTS4 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.66□□□□□ -0.22
Nup54Q8BTS4 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms