Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp54Q8BL06 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Usp54Q8BL06 Gm37666-201ENSMUST00000194110 866 ntBASIC18.67■□□□□ 0.58
Usp54Q8BL06 Gzmn-202ENSMUST00000225535 989 ntBASIC18.67■□□□□ 0.58
Usp54Q8BL06 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Usp54Q8BL06 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Usp54Q8BL06 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp54Q8BL06 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp54Q8BL06 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Usp54Q8BL06 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Usp54Q8BL06 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Usp54Q8BL06 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Usp54Q8BL06 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp54Q8BL06 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
Usp54Q8BL06 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp54Q8BL06 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Usp54Q8BL06 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Usp54Q8BL06 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp54Q8BL06 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp54Q8BL06 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp54Q8BL06 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Usp54Q8BL06 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Usp54Q8BL06 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC18.66■□□□□ 0.58
Usp54Q8BL06 Gm24514-201ENSMUST00000174961 285 ntBASIC18.66■□□□□ 0.58
Usp54Q8BL06 Gm27023-201ENSMUST00000182372 285 ntBASIC18.66■□□□□ 0.58
Usp54Q8BL06 Rprl1-202ENSMUST00000198476 238 ntBASIC18.66■□□□□ 0.58
Usp54Q8BL06 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC18.66■□□□□ 0.58
Usp54Q8BL06 AC154222.2-201ENSMUST00000225848 607 ntBASIC18.66■□□□□ 0.58
Usp54Q8BL06 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp54Q8BL06 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp54Q8BL06 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Usp54Q8BL06 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp54Q8BL06 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp54Q8BL06 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp54Q8BL06 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp54Q8BL06 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Usp54Q8BL06 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp54Q8BL06 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Usp54Q8BL06 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Usp54Q8BL06 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp54Q8BL06 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp54Q8BL06 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC18.65■□□□□ 0.58
Usp54Q8BL06 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Usp54Q8BL06 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp54Q8BL06 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp54Q8BL06 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Usp54Q8BL06 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp54Q8BL06 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Usp54Q8BL06 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC18.65■□□□□ 0.58
Usp54Q8BL06 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Usp54Q8BL06 CU062626.3-201ENSMUST00000225522 1411 ntBASIC18.65■□□□□ 0.58
Usp54Q8BL06 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Usp54Q8BL06 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Usp54Q8BL06 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Usp54Q8BL06 Sybu-209ENSMUST00000228639 4113 ntBASIC18.65■□□□□ 0.58
Usp54Q8BL06 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp54Q8BL06 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp54Q8BL06 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp54Q8BL06 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp54Q8BL06 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp54Q8BL06 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp54Q8BL06 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Usp54Q8BL06 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Usp54Q8BL06 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Usp54Q8BL06 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Usp54Q8BL06 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Usp54Q8BL06 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Usp54Q8BL06 Gm16481-201ENSMUST00000119074 1227 ntBASIC18.64■□□□□ 0.58
Usp54Q8BL06 CT025694.1-201ENSMUST00000226188 934 ntBASIC18.64■□□□□ 0.58
Usp54Q8BL06 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp54Q8BL06 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Usp54Q8BL06 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp54Q8BL06 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp54Q8BL06 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
Usp54Q8BL06 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC18.64■□□□□ 0.57
Usp54Q8BL06 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Usp54Q8BL06 Gm13996-201ENSMUST00000118456 430 ntBASIC18.64■□□□□ 0.57
Usp54Q8BL06 Gm12201-201ENSMUST00000120657 1234 ntBASIC18.64■□□□□ 0.57
Usp54Q8BL06 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp54Q8BL06 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC18.64■□□□□ 0.57
Usp54Q8BL06 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC18.64■□□□□ 0.57
Usp54Q8BL06 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Usp54Q8BL06 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Usp54Q8BL06 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Usp54Q8BL06 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp54Q8BL06 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Usp54Q8BL06 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Usp54Q8BL06 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp54Q8BL06 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Usp54Q8BL06 Gm45495-201ENSMUST00000200940 1700 ntBASIC18.63■□□□□ 0.57
Usp54Q8BL06 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp54Q8BL06 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Usp54Q8BL06 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC18.63■□□□□ 0.57
Usp54Q8BL06 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp54Q8BL06 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC18.63■□□□□ 0.57
Usp54Q8BL06 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC18.63■□□□□ 0.57
Usp54Q8BL06 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Usp54Q8BL06 Gm44094-201ENSMUST00000204703 2030 ntBASIC18.63■□□□□ 0.57
Usp54Q8BL06 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Usp54Q8BL06 Gm5989-201ENSMUST00000096092 2077 ntBASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms