Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SynbQ8BI41 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SynbQ8BI41 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
SynbQ8BI41 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SynbQ8BI41 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
SynbQ8BI41 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SynbQ8BI41 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
SynbQ8BI41 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.8□□□□□ -0.36
SynbQ8BI41 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SynbQ8BI41 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SynbQ8BI41 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SynbQ8BI41 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SynbQ8BI41 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SynbQ8BI41 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SynbQ8BI41 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SynbQ8BI41 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SynbQ8BI41 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SynbQ8BI41 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
SynbQ8BI41 Gm13385-201ENSMUST00000121089 220 ntBASIC12.8□□□□□ -0.36
SynbQ8BI41 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.8□□□□□ -0.36
SynbQ8BI41 Gm26464-201ENSMUST00000157094 305 ntBASIC12.8□□□□□ -0.36
SynbQ8BI41 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.8□□□□□ -0.36
SynbQ8BI41 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.8□□□□□ -0.36
SynbQ8BI41 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.8□□□□□ -0.36
SynbQ8BI41 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC12.8□□□□□ -0.36
SynbQ8BI41 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.8□□□□□ -0.36
SynbQ8BI41 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SynbQ8BI41 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SynbQ8BI41 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SynbQ8BI41 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.8□□□□□ -0.36
SynbQ8BI41 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SynbQ8BI41 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.8□□□□□ -0.36
SynbQ8BI41 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
SynbQ8BI41 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.8□□□□□ -0.36
SynbQ8BI41 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
SynbQ8BI41 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SynbQ8BI41 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SynbQ8BI41 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SynbQ8BI41 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SynbQ8BI41 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SynbQ8BI41 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SynbQ8BI41 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SynbQ8BI41 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SynbQ8BI41 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SynbQ8BI41 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SynbQ8BI41 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SynbQ8BI41 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
SynbQ8BI41 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SynbQ8BI41 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SynbQ8BI41 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SynbQ8BI41 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SynbQ8BI41 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SynbQ8BI41 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SynbQ8BI41 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SynbQ8BI41 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SynbQ8BI41 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SynbQ8BI41 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SynbQ8BI41 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SynbQ8BI41 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SynbQ8BI41 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
SynbQ8BI41 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SynbQ8BI41 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SynbQ8BI41 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.79□□□□□ -0.36
SynbQ8BI41 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SynbQ8BI41 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SynbQ8BI41 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
SynbQ8BI41 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SynbQ8BI41 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.79□□□□□ -0.36
SynbQ8BI41 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.79□□□□□ -0.36
SynbQ8BI41 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
SynbQ8BI41 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
SynbQ8BI41 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.79□□□□□ -0.36
SynbQ8BI41 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.79□□□□□ -0.36
SynbQ8BI41 Gm27731-201ENSMUST00000185192 107 ntBASIC12.79□□□□□ -0.36
SynbQ8BI41 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.79□□□□□ -0.36
SynbQ8BI41 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.79□□□□□ -0.36
SynbQ8BI41 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
SynbQ8BI41 Gm6091-201ENSMUST00000098307 165 ntBASIC12.79□□□□□ -0.36
SynbQ8BI41 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SynbQ8BI41 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SynbQ8BI41 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SynbQ8BI41 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SynbQ8BI41 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SynbQ8BI41 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SynbQ8BI41 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SynbQ8BI41 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
SynbQ8BI41 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SynbQ8BI41 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
SynbQ8BI41 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
SynbQ8BI41 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.79□□□□□ -0.36
SynbQ8BI41 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SynbQ8BI41 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SynbQ8BI41 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
SynbQ8BI41 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SynbQ8BI41 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SynbQ8BI41 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SynbQ8BI41 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SynbQ8BI41 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
SynbQ8BI41 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SynbQ8BI41 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms