Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Samm50Q8BGH2 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Samm50Q8BGH2 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Samm50Q8BGH2 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Samm50Q8BGH2 Gm22189-201ENSMUST00000103822 86 ntBASIC15.7■□□□□ 0.1
Samm50Q8BGH2 Gm10327-201ENSMUST00000105222 1002 ntBASIC15.7■□□□□ 0.1
Samm50Q8BGH2 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Samm50Q8BGH2 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Samm50Q8BGH2 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC15.7■□□□□ 0.1
Samm50Q8BGH2 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC15.7■□□□□ 0.1
Samm50Q8BGH2 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Samm50Q8BGH2 Gm6473-201ENSMUST00000188572 1210 ntBASIC15.7■□□□□ 0.1
Samm50Q8BGH2 Gm5069-202ENSMUST00000192714 1011 ntBASIC15.7■□□□□ 0.1
Samm50Q8BGH2 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC15.7■□□□□ 0.1
Samm50Q8BGH2 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC15.7■□□□□ 0.1
Samm50Q8BGH2 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Samm50Q8BGH2 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Samm50Q8BGH2 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Samm50Q8BGH2 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Samm50Q8BGH2 Ssr1-203ENSMUST00000225246 1825 ntBASIC15.7■□□□□ 0.1
Samm50Q8BGH2 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Samm50Q8BGH2 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Samm50Q8BGH2 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Samm50Q8BGH2 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Samm50Q8BGH2 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Samm50Q8BGH2 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Samm50Q8BGH2 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Samm50Q8BGH2 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Samm50Q8BGH2 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Samm50Q8BGH2 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Samm50Q8BGH2 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Samm50Q8BGH2 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Samm50Q8BGH2 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC15.69■□□□□ 0.1
Samm50Q8BGH2 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Samm50Q8BGH2 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Samm50Q8BGH2 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Samm50Q8BGH2 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Samm50Q8BGH2 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Samm50Q8BGH2 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Samm50Q8BGH2 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Samm50Q8BGH2 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Samm50Q8BGH2 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC15.69■□□□□ 0.1
Samm50Q8BGH2 Gm31326-201ENSMUST00000191856 1048 ntBASIC15.69■□□□□ 0.1
Samm50Q8BGH2 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC15.69■□□□□ 0.1
Samm50Q8BGH2 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Samm50Q8BGH2 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Samm50Q8BGH2 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Samm50Q8BGH2 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC15.69■□□□□ 0.1
Samm50Q8BGH2 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Samm50Q8BGH2 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Samm50Q8BGH2 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Samm50Q8BGH2 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Samm50Q8BGH2 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Samm50Q8BGH2 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Samm50Q8BGH2 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Samm50Q8BGH2 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Samm50Q8BGH2 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Samm50Q8BGH2 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Samm50Q8BGH2 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Samm50Q8BGH2 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Samm50Q8BGH2 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC15.68■□□□□ 0.1
Samm50Q8BGH2 Gm14452-201ENSMUST00000118680 1632 ntBASIC15.68■□□□□ 0.1
Samm50Q8BGH2 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Samm50Q8BGH2 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Samm50Q8BGH2 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Samm50Q8BGH2 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Samm50Q8BGH2 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Samm50Q8BGH2 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Samm50Q8BGH2 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Samm50Q8BGH2 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Samm50Q8BGH2 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Samm50Q8BGH2 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Samm50Q8BGH2 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC15.68■□□□□ 0.1
Samm50Q8BGH2 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Samm50Q8BGH2 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Samm50Q8BGH2 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Samm50Q8BGH2 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC15.68■□□□□ 0.1
Samm50Q8BGH2 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Samm50Q8BGH2 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Samm50Q8BGH2 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC15.68■□□□□ 0.1
Samm50Q8BGH2 AL593843.1-201ENSMUST00000195891 145 ntBASIC15.68■□□□□ 0.1
Samm50Q8BGH2 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC15.68■□□□□ 0.1
Samm50Q8BGH2 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Samm50Q8BGH2 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Samm50Q8BGH2 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Samm50Q8BGH2 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Samm50Q8BGH2 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Samm50Q8BGH2 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Samm50Q8BGH2 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Samm50Q8BGH2 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Samm50Q8BGH2 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Samm50Q8BGH2 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Samm50Q8BGH2 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Samm50Q8BGH2 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Samm50Q8BGH2 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Samm50Q8BGH2 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Samm50Q8BGH2 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Samm50Q8BGH2 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Samm50Q8BGH2 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Samm50Q8BGH2 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms