Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Prpf40bQ80W14 Gm13385-201ENSMUST00000121089 220 ntBASIC15.44■□□□□ 0.06
Prpf40bQ80W14 Gm12176-201ENSMUST00000121420 875 ntBASIC15.44■□□□□ 0.06
Prpf40bQ80W14 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Prpf40bQ80W14 Gm9368-201ENSMUST00000219348 831 ntBASIC15.44■□□□□ 0.06
Prpf40bQ80W14 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Prpf40bQ80W14 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Prpf40bQ80W14 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Prpf40bQ80W14 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Prpf40bQ80W14 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Prpf40bQ80W14 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Prpf40bQ80W14 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Prpf40bQ80W14 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Prpf40bQ80W14 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Prpf40bQ80W14 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Prpf40bQ80W14 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Prpf40bQ80W14 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Prpf40bQ80W14 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Prpf40bQ80W14 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Prpf40bQ80W14 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Prpf40bQ80W14 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf40bQ80W14 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC15.43■□□□□ 0.06
Prpf40bQ80W14 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf40bQ80W14 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf40bQ80W14 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf40bQ80W14 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf40bQ80W14 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
Prpf40bQ80W14 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC15.43■□□□□ 0.06
Prpf40bQ80W14 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Prpf40bQ80W14 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf40bQ80W14 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC15.43■□□□□ 0.06
Prpf40bQ80W14 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC15.43■□□□□ 0.06
Prpf40bQ80W14 AC131690.1-201ENSMUST00000218406 374 ntBASIC15.43■□□□□ 0.06
Prpf40bQ80W14 Gm18473-201ENSMUST00000220543 868 ntBASIC15.43■□□□□ 0.06
Prpf40bQ80W14 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf40bQ80W14 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf40bQ80W14 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf40bQ80W14 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf40bQ80W14 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf40bQ80W14 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf40bQ80W14 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf40bQ80W14 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf40bQ80W14 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf40bQ80W14 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Prpf40bQ80W14 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf40bQ80W14 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC15.43■□□□□ 0.06
Prpf40bQ80W14 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf40bQ80W14 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf40bQ80W14 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Prpf40bQ80W14 Gm37015-201ENSMUST00000192763 1521 ntBASIC15.43■□□□□ 0.06
Prpf40bQ80W14 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf40bQ80W14 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf40bQ80W14 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf40bQ80W14 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf40bQ80W14 Gm18244-201ENSMUST00000219747 1566 ntBASIC15.42■□□□□ 0.06
Prpf40bQ80W14 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf40bQ80W14 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf40bQ80W14 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf40bQ80W14 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC15.42■□□□□ 0.06
Prpf40bQ80W14 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Prpf40bQ80W14 Proscos-202ENSMUST00000178990 666 ntBASIC15.42■□□□□ 0.06
Prpf40bQ80W14 Gm27682-201ENSMUST00000183930 110 ntBASIC15.42■□□□□ 0.06
Prpf40bQ80W14 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC15.42■□□□□ 0.06
Prpf40bQ80W14 Gm38000-201ENSMUST00000192390 1215 ntBASIC15.42■□□□□ 0.06
Prpf40bQ80W14 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC15.42■□□□□ 0.06
Prpf40bQ80W14 Gm6334-201ENSMUST00000207083 228 ntBASIC15.42■□□□□ 0.06
Prpf40bQ80W14 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf40bQ80W14 Gm18027-201ENSMUST00000218947 619 ntBASIC15.42■□□□□ 0.06
Prpf40bQ80W14 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Prpf40bQ80W14 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC15.42■□□□□ 0.06
Prpf40bQ80W14 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf40bQ80W14 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf40bQ80W14 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf40bQ80W14 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf40bQ80W14 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf40bQ80W14 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf40bQ80W14 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Prpf40bQ80W14 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
Prpf40bQ80W14 Gm38197-201ENSMUST00000192320 2122 ntBASIC15.41■□□□□ 0.06
Prpf40bQ80W14 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Prpf40bQ80W14 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Prpf40bQ80W14 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Prpf40bQ80W14 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Prpf40bQ80W14 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Prpf40bQ80W14 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Prpf40bQ80W14 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC15.41■□□□□ 0.06
Prpf40bQ80W14 Gm11557-201ENSMUST00000120200 1008 ntBASIC15.41■□□□□ 0.06
Prpf40bQ80W14 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
Prpf40bQ80W14 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC15.41■□□□□ 0.06
Prpf40bQ80W14 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC15.41■□□□□ 0.06
Prpf40bQ80W14 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC15.41■□□□□ 0.06
Prpf40bQ80W14 Gm8927-201ENSMUST00000181978 981 ntBASIC15.41■□□□□ 0.06
Prpf40bQ80W14 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC15.41■□□□□ 0.06
Prpf40bQ80W14 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC15.41■□□□□ 0.06
Prpf40bQ80W14 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC15.41■□□□□ 0.06
Prpf40bQ80W14 Gm45865-201ENSMUST00000211815 945 ntBASIC15.41■□□□□ 0.06
Prpf40bQ80W14 Gm3222-201ENSMUST00000071282 990 ntBASIC15.41■□□□□ 0.06
Prpf40bQ80W14 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Prpf40bQ80W14 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Prpf40bQ80W14 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms