Protein–RNA interactions for Protein: Q78WZ7

Twistnb, DNA-directed RNA polymerase I subunit RPA43, mousemouse

Known RBP Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TwistnbQ78WZ7 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TwistnbQ78WZ7 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TwistnbQ78WZ7 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.61□□□□□ -0.23
TwistnbQ78WZ7 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
TwistnbQ78WZ7 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TwistnbQ78WZ7 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
TwistnbQ78WZ7 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TwistnbQ78WZ7 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TwistnbQ78WZ7 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TwistnbQ78WZ7 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TwistnbQ78WZ7 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TwistnbQ78WZ7 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TwistnbQ78WZ7 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TwistnbQ78WZ7 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TwistnbQ78WZ7 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC13.61□□□□□ -0.23
TwistnbQ78WZ7 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
TwistnbQ78WZ7 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.61□□□□□ -0.23
TwistnbQ78WZ7 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.61□□□□□ -0.23
TwistnbQ78WZ7 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
TwistnbQ78WZ7 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
TwistnbQ78WZ7 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TwistnbQ78WZ7 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
TwistnbQ78WZ7 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TwistnbQ78WZ7 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TwistnbQ78WZ7 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TwistnbQ78WZ7 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.61□□□□□ -0.23
TwistnbQ78WZ7 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TwistnbQ78WZ7 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TwistnbQ78WZ7 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TwistnbQ78WZ7 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TwistnbQ78WZ7 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TwistnbQ78WZ7 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
TwistnbQ78WZ7 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.61□□□□□ -0.23
TwistnbQ78WZ7 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TwistnbQ78WZ7 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TwistnbQ78WZ7 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC13.61□□□□□ -0.23
TwistnbQ78WZ7 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TwistnbQ78WZ7 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
TwistnbQ78WZ7 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TwistnbQ78WZ7 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TwistnbQ78WZ7 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TwistnbQ78WZ7 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TwistnbQ78WZ7 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.6□□□□□ -0.23
TwistnbQ78WZ7 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TwistnbQ78WZ7 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
TwistnbQ78WZ7 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TwistnbQ78WZ7 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TwistnbQ78WZ7 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.6□□□□□ -0.23
TwistnbQ78WZ7 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TwistnbQ78WZ7 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC13.6□□□□□ -0.23
TwistnbQ78WZ7 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TwistnbQ78WZ7 Gm13015-201ENSMUST00000118674 204 ntBASIC13.6□□□□□ -0.23
TwistnbQ78WZ7 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.6□□□□□ -0.23
TwistnbQ78WZ7 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TwistnbQ78WZ7 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TwistnbQ78WZ7 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC13.6□□□□□ -0.23
TwistnbQ78WZ7 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
TwistnbQ78WZ7 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TwistnbQ78WZ7 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.6□□□□□ -0.23
TwistnbQ78WZ7 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TwistnbQ78WZ7 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TwistnbQ78WZ7 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TwistnbQ78WZ7 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.6□□□□□ -0.23
TwistnbQ78WZ7 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TwistnbQ78WZ7 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.6□□□□□ -0.23
TwistnbQ78WZ7 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TwistnbQ78WZ7 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TwistnbQ78WZ7 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TwistnbQ78WZ7 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TwistnbQ78WZ7 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TwistnbQ78WZ7 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
TwistnbQ78WZ7 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
TwistnbQ78WZ7 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TwistnbQ78WZ7 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TwistnbQ78WZ7 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TwistnbQ78WZ7 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TwistnbQ78WZ7 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TwistnbQ78WZ7 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
TwistnbQ78WZ7 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TwistnbQ78WZ7 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TwistnbQ78WZ7 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TwistnbQ78WZ7 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TwistnbQ78WZ7 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TwistnbQ78WZ7 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.59□□□□□ -0.23
TwistnbQ78WZ7 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TwistnbQ78WZ7 Mir874-201ENSMUST00000104769 76 ntBASIC13.59□□□□□ -0.23
TwistnbQ78WZ7 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.59□□□□□ -0.23
TwistnbQ78WZ7 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.59□□□□□ -0.23
TwistnbQ78WZ7 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.59□□□□□ -0.23
TwistnbQ78WZ7 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TwistnbQ78WZ7 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.59□□□□□ -0.23
TwistnbQ78WZ7 Gm6916-202ENSMUST00000205523 195 ntBASIC13.59□□□□□ -0.23
TwistnbQ78WZ7 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TwistnbQ78WZ7 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TwistnbQ78WZ7 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.59□□□□□ -0.23
TwistnbQ78WZ7 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
TwistnbQ78WZ7 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TwistnbQ78WZ7 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TwistnbQ78WZ7 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TwistnbQ78WZ7 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms