Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vma21Q78T54 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
Vma21Q78T54 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vma21Q78T54 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC10.91□□□□□ -0.66
Vma21Q78T54 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Vma21Q78T54 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vma21Q78T54 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Vma21Q78T54 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Vma21Q78T54 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Vma21Q78T54 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC10.91□□□□□ -0.66
Vma21Q78T54 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Vma21Q78T54 Gm27430-201ENSMUST00000184585 107 ntBASIC10.91□□□□□ -0.66
Vma21Q78T54 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC10.91□□□□□ -0.66
Vma21Q78T54 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC10.91□□□□□ -0.66
Vma21Q78T54 Gm44333-201ENSMUST00000197168 107 ntBASIC10.91□□□□□ -0.66
Vma21Q78T54 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC10.91□□□□□ -0.66
Vma21Q78T54 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC10.91□□□□□ -0.66
Vma21Q78T54 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vma21Q78T54 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vma21Q78T54 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vma21Q78T54 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vma21Q78T54 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC10.91□□□□□ -0.66
Vma21Q78T54 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Vma21Q78T54 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vma21Q78T54 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vma21Q78T54 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vma21Q78T54 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vma21Q78T54 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vma21Q78T54 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vma21Q78T54 Gm7899-201ENSMUST00000192935 1897 ntBASIC10.91□□□□□ -0.66
Vma21Q78T54 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vma21Q78T54 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Vma21Q78T54 AC124751.1-201ENSMUST00000222716 1408 ntBASIC10.91□□□□□ -0.66
Vma21Q78T54 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vma21Q78T54 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Vma21Q78T54 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Vma21Q78T54 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Vma21Q78T54 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Vma21Q78T54 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Vma21Q78T54 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Vma21Q78T54 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Vma21Q78T54 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC10.9□□□□□ -0.66
Vma21Q78T54 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Vma21Q78T54 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Vma21Q78T54 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Vma21Q78T54 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Vma21Q78T54 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC10.9□□□□□ -0.66
Vma21Q78T54 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Vma21Q78T54 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Vma21Q78T54 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Vma21Q78T54 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Vma21Q78T54 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Vma21Q78T54 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Vma21Q78T54 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
Vma21Q78T54 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Vma21Q78T54 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Vma21Q78T54 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Vma21Q78T54 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Vma21Q78T54 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Vma21Q78T54 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Vma21Q78T54 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Vma21Q78T54 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC10.9□□□□□ -0.66
Vma21Q78T54 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Vma21Q78T54 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC10.9□□□□□ -0.66
Vma21Q78T54 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC10.9□□□□□ -0.66
Vma21Q78T54 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC10.9□□□□□ -0.66
Vma21Q78T54 Gm3436-201ENSMUST00000179930 840 ntBASIC10.9□□□□□ -0.66
Vma21Q78T54 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC10.9□□□□□ -0.66
Vma21Q78T54 Chchd1-203ENSMUST00000224633 557 ntBASIC10.9□□□□□ -0.66
Vma21Q78T54 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Vma21Q78T54 Gm3695-201ENSMUST00000087222 1009 ntBASIC10.9□□□□□ -0.66
Vma21Q78T54 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Vma21Q78T54 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Vma21Q78T54 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Vma21Q78T54 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Vma21Q78T54 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Vma21Q78T54 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Vma21Q78T54 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC10.9□□□□□ -0.66
Vma21Q78T54 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Vma21Q78T54 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Vma21Q78T54 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Vma21Q78T54 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
Vma21Q78T54 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Vma21Q78T54 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Vma21Q78T54 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Vma21Q78T54 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Vma21Q78T54 Gm37861-201ENSMUST00000193534 2869 ntBASIC10.9□□□□□ -0.67
Vma21Q78T54 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Vma21Q78T54 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Vma21Q78T54 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Vma21Q78T54 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Vma21Q78T54 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Vma21Q78T54 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.67
Vma21Q78T54 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.67
Vma21Q78T54 Gm20632-201ENSMUST00000176760 2427 ntBASIC10.89□□□□□ -0.67
Vma21Q78T54 Gm43134-201ENSMUST00000199434 1886 ntBASIC10.89□□□□□ -0.67
Vma21Q78T54 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Vma21Q78T54 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vma21Q78T54 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Vma21Q78T54 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms