Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scaf4Q6PFF0 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scaf4Q6PFF0 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scaf4Q6PFF0 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.2□□□□□ -0.3
Scaf4Q6PFF0 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Scaf4Q6PFF0 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scaf4Q6PFF0 Gm44335-201ENSMUST00000196879 141 ntBASIC13.2□□□□□ -0.3
Scaf4Q6PFF0 Gm44297-201ENSMUST00000198304 141 ntBASIC13.2□□□□□ -0.3
Scaf4Q6PFF0 Gm44346-201ENSMUST00000198851 141 ntBASIC13.2□□□□□ -0.3
Scaf4Q6PFF0 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.2□□□□□ -0.3
Scaf4Q6PFF0 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Scaf4Q6PFF0 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scaf4Q6PFF0 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Scaf4Q6PFF0 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Scaf4Q6PFF0 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scaf4Q6PFF0 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scaf4Q6PFF0 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scaf4Q6PFF0 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scaf4Q6PFF0 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scaf4Q6PFF0 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scaf4Q6PFF0 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.2□□□□□ -0.3
Scaf4Q6PFF0 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scaf4Q6PFF0 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Scaf4Q6PFF0 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.2□□□□□ -0.3
Scaf4Q6PFF0 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Scaf4Q6PFF0 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Scaf4Q6PFF0 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scaf4Q6PFF0 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scaf4Q6PFF0 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scaf4Q6PFF0 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.2□□□□□ -0.3
Scaf4Q6PFF0 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Scaf4Q6PFF0 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scaf4Q6PFF0 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.19□□□□□ -0.3
Scaf4Q6PFF0 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scaf4Q6PFF0 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.19□□□□□ -0.3
Scaf4Q6PFF0 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scaf4Q6PFF0 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.19□□□□□ -0.3
Scaf4Q6PFF0 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Scaf4Q6PFF0 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scaf4Q6PFF0 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scaf4Q6PFF0 Gm15393-201ENSMUST00000120499 219 ntBASIC13.19□□□□□ -0.3
Scaf4Q6PFF0 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.19□□□□□ -0.3
Scaf4Q6PFF0 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.19□□□□□ -0.3
Scaf4Q6PFF0 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Scaf4Q6PFF0 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scaf4Q6PFF0 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scaf4Q6PFF0 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scaf4Q6PFF0 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Scaf4Q6PFF0 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scaf4Q6PFF0 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scaf4Q6PFF0 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Scaf4Q6PFF0 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scaf4Q6PFF0 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scaf4Q6PFF0 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scaf4Q6PFF0 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scaf4Q6PFF0 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Scaf4Q6PFF0 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.19□□□□□ -0.3
Scaf4Q6PFF0 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scaf4Q6PFF0 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Scaf4Q6PFF0 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scaf4Q6PFF0 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Scaf4Q6PFF0 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Scaf4Q6PFF0 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scaf4Q6PFF0 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scaf4Q6PFF0 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.18□□□□□ -0.3
Scaf4Q6PFF0 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Scaf4Q6PFF0 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scaf4Q6PFF0 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scaf4Q6PFF0 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scaf4Q6PFF0 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scaf4Q6PFF0 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scaf4Q6PFF0 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scaf4Q6PFF0 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scaf4Q6PFF0 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.18□□□□□ -0.3
Scaf4Q6PFF0 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scaf4Q6PFF0 Gm4995-201ENSMUST00000117247 432 ntBASIC13.18□□□□□ -0.3
Scaf4Q6PFF0 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.18□□□□□ -0.3
Scaf4Q6PFF0 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Scaf4Q6PFF0 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.18□□□□□ -0.3
Scaf4Q6PFF0 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Scaf4Q6PFF0 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Scaf4Q6PFF0 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scaf4Q6PFF0 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scaf4Q6PFF0 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scaf4Q6PFF0 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.18□□□□□ -0.3
Scaf4Q6PFF0 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scaf4Q6PFF0 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.18□□□□□ -0.3
Scaf4Q6PFF0 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.18□□□□□ -0.3
Scaf4Q6PFF0 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scaf4Q6PFF0 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Scaf4Q6PFF0 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Scaf4Q6PFF0 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scaf4Q6PFF0 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Scaf4Q6PFF0 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scaf4Q6PFF0 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scaf4Q6PFF0 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Scaf4Q6PFF0 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Scaf4Q6PFF0 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scaf4Q6PFF0 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scaf4Q6PFF0 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms