Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
CtifQ6PEE2 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.24□□□□□ -0.13
CtifQ6PEE2 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CtifQ6PEE2 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CtifQ6PEE2 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CtifQ6PEE2 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CtifQ6PEE2 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CtifQ6PEE2 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CtifQ6PEE2 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.24□□□□□ -0.13
CtifQ6PEE2 Gm18027-201ENSMUST00000218947 619 ntBASIC14.24□□□□□ -0.13
CtifQ6PEE2 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.24□□□□□ -0.13
CtifQ6PEE2 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CtifQ6PEE2 BC001981-202ENSMUST00000191393 1545 ntBASIC14.24□□□□□ -0.13
CtifQ6PEE2 Gm43174-201ENSMUST00000195914 2445 ntBASIC14.24□□□□□ -0.13
CtifQ6PEE2 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CtifQ6PEE2 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CtifQ6PEE2 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CtifQ6PEE2 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CtifQ6PEE2 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CtifQ6PEE2 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CtifQ6PEE2 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CtifQ6PEE2 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CtifQ6PEE2 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CtifQ6PEE2 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
CtifQ6PEE2 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CtifQ6PEE2 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CtifQ6PEE2 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CtifQ6PEE2 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CtifQ6PEE2 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CtifQ6PEE2 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CtifQ6PEE2 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CtifQ6PEE2 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CtifQ6PEE2 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CtifQ6PEE2 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CtifQ6PEE2 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CtifQ6PEE2 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CtifQ6PEE2 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.23□□□□□ -0.13
CtifQ6PEE2 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.23□□□□□ -0.13
CtifQ6PEE2 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CtifQ6PEE2 Gm6736-201ENSMUST00000166583 948 ntBASIC14.23□□□□□ -0.13
CtifQ6PEE2 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CtifQ6PEE2 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.23□□□□□ -0.13
CtifQ6PEE2 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.23□□□□□ -0.13
CtifQ6PEE2 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.23□□□□□ -0.13
CtifQ6PEE2 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.23□□□□□ -0.13
CtifQ6PEE2 Rps4l-201ENSMUST00000071745 943 ntBASIC14.23□□□□□ -0.13
CtifQ6PEE2 Mir497b-201ENSMUST00000093601 125 ntBASIC14.23□□□□□ -0.13
CtifQ6PEE2 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC14.23□□□□□ -0.13
CtifQ6PEE2 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CtifQ6PEE2 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CtifQ6PEE2 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CtifQ6PEE2 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CtifQ6PEE2 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CtifQ6PEE2 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC14.23□□□□□ -0.13
CtifQ6PEE2 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC14.23□□□□□ -0.13
CtifQ6PEE2 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC14.23□□□□□ -0.13
CtifQ6PEE2 Gm6210-201ENSMUST00000204734 1942 ntBASIC14.23□□□□□ -0.13
CtifQ6PEE2 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CtifQ6PEE2 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CtifQ6PEE2 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CtifQ6PEE2 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CtifQ6PEE2 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CtifQ6PEE2 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CtifQ6PEE2 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
CtifQ6PEE2 Gm43102-201ENSMUST00000201004 2324 ntBASIC14.23□□□□□ -0.13
CtifQ6PEE2 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.23□□□□□ -0.13
CtifQ6PEE2 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CtifQ6PEE2 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC14.22□□□□□ -0.13
CtifQ6PEE2 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CtifQ6PEE2 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CtifQ6PEE2 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CtifQ6PEE2 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CtifQ6PEE2 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC14.22□□□□□ -0.13
CtifQ6PEE2 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CtifQ6PEE2 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CtifQ6PEE2 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
CtifQ6PEE2 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CtifQ6PEE2 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CtifQ6PEE2 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CtifQ6PEE2 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CtifQ6PEE2 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CtifQ6PEE2 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.22□□□□□ -0.13
CtifQ6PEE2 Gm27920-201ENSMUST00000183953 96 ntBASIC14.22□□□□□ -0.13
CtifQ6PEE2 Gm27702-201ENSMUST00000184512 56 ntBASIC14.22□□□□□ -0.13
CtifQ6PEE2 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CtifQ6PEE2 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CtifQ6PEE2 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CtifQ6PEE2 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CtifQ6PEE2 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CtifQ6PEE2 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CtifQ6PEE2 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CtifQ6PEE2 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CtifQ6PEE2 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CtifQ6PEE2 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CtifQ6PEE2 Gm37513-201ENSMUST00000194830 2268 ntBASIC14.22□□□□□ -0.13
CtifQ6PEE2 Gm38378-201ENSMUST00000195153 2268 ntBASIC14.22□□□□□ -0.13
CtifQ6PEE2 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CtifQ6PEE2 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CtifQ6PEE2 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CtifQ6PEE2 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms