Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Ankra2-208ENSMUST00000226100 1476 ntBASIC15.63■□□□□ 0.09
Smarcc2Q6PDG5 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcc2Q6PDG5 Gm37861-201ENSMUST00000193534 2869 ntBASIC15.63■□□□□ 0.09
Smarcc2Q6PDG5 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcc2Q6PDG5 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Smarcc2Q6PDG5 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcc2Q6PDG5 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcc2Q6PDG5 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcc2Q6PDG5 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcc2Q6PDG5 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcc2Q6PDG5 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC15.63■□□□□ 0.09
Smarcc2Q6PDG5 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcc2Q6PDG5 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcc2Q6PDG5 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Smarcc2Q6PDG5 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcc2Q6PDG5 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcc2Q6PDG5 Gm45638-201ENSMUST00000211507 2878 ntBASIC15.62■□□□□ 0.09
Smarcc2Q6PDG5 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcc2Q6PDG5 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcc2Q6PDG5 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcc2Q6PDG5 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcc2Q6PDG5 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Smarcc2Q6PDG5 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcc2Q6PDG5 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC15.62■□□□□ 0.09
Smarcc2Q6PDG5 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcc2Q6PDG5 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
Smarcc2Q6PDG5 Mir7654-201ENSMUST00000185082 70 ntBASIC15.62■□□□□ 0.09
Smarcc2Q6PDG5 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC15.62■□□□□ 0.09
Smarcc2Q6PDG5 Gm45059-201ENSMUST00000205558 1077 ntBASIC15.62■□□□□ 0.09
Smarcc2Q6PDG5 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcc2Q6PDG5 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC15.62■□□□□ 0.09
Smarcc2Q6PDG5 Gm45384-201ENSMUST00000210451 277 ntBASIC15.62■□□□□ 0.09
Smarcc2Q6PDG5 Gm17870-201ENSMUST00000219489 1174 ntBASIC15.62■□□□□ 0.09
Smarcc2Q6PDG5 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC15.62■□□□□ 0.09
Smarcc2Q6PDG5 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcc2Q6PDG5 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcc2Q6PDG5 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcc2Q6PDG5 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcc2Q6PDG5 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcc2Q6PDG5 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Smarcc2Q6PDG5 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcc2Q6PDG5 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Smarcc2Q6PDG5 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcc2Q6PDG5 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Smarcc2Q6PDG5 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smarcc2Q6PDG5 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smarcc2Q6PDG5 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smarcc2Q6PDG5 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smarcc2Q6PDG5 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smarcc2Q6PDG5 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Smarcc2Q6PDG5 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Smarcc2Q6PDG5 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Smarcc2Q6PDG5 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smarcc2Q6PDG5 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Smarcc2Q6PDG5 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smarcc2Q6PDG5 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Smarcc2Q6PDG5 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smarcc2Q6PDG5 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Smarcc2Q6PDG5 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC15.61■□□□□ 0.09
Smarcc2Q6PDG5 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC15.61■□□□□ 0.09
Smarcc2Q6PDG5 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC15.61■□□□□ 0.09
Smarcc2Q6PDG5 AC159006.1-201ENSMUST00000226396 258 ntBASIC15.61■□□□□ 0.09
Smarcc2Q6PDG5 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smarcc2Q6PDG5 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smarcc2Q6PDG5 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC15.61■□□□□ 0.09
Smarcc2Q6PDG5 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smarcc2Q6PDG5 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smarcc2Q6PDG5 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Smarcc2Q6PDG5 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Smarcc2Q6PDG5 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Smarcc2Q6PDG5 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Smarcc2Q6PDG5 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC15.61■□□□□ 0.09
Smarcc2Q6PDG5 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Smarcc2Q6PDG5 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smarcc2Q6PDG5 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Smarcc2Q6PDG5 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smarcc2Q6PDG5 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Smarcc2Q6PDG5 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Smarcc2Q6PDG5 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
Smarcc2Q6PDG5 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Smarcc2Q6PDG5 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC15.6■□□□□ 0.09
Smarcc2Q6PDG5 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC15.6■□□□□ 0.09
Smarcc2Q6PDG5 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smarcc2Q6PDG5 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smarcc2Q6PDG5 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smarcc2Q6PDG5 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smarcc2Q6PDG5 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smarcc2Q6PDG5 Gm12485-201ENSMUST00000119641 291 ntBASIC15.6■□□□□ 0.09
Smarcc2Q6PDG5 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC15.6■□□□□ 0.09
Smarcc2Q6PDG5 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC15.6■□□□□ 0.09
Smarcc2Q6PDG5 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC15.6■□□□□ 0.09
Smarcc2Q6PDG5 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Smarcc2Q6PDG5 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC15.6■□□□□ 0.09
Smarcc2Q6PDG5 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC15.6■□□□□ 0.09
Smarcc2Q6PDG5 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC15.6■□□□□ 0.09
Smarcc2Q6PDG5 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Smarcc2Q6PDG5 Gm5186-201ENSMUST00000218781 920 ntBASIC15.6■□□□□ 0.09
Smarcc2Q6PDG5 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Smarcc2Q6PDG5 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
Smarcc2Q6PDG5 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms