Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slx4Q6P1D7 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Slx4Q6P1D7 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slx4Q6P1D7 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slx4Q6P1D7 Gm7789-202ENSMUST00000211273 1400 ntBASIC20.22■□□□□ 0.83
Slx4Q6P1D7 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Slx4Q6P1D7 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slx4Q6P1D7 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Slx4Q6P1D7 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slx4Q6P1D7 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slx4Q6P1D7 Gm13045-201ENSMUST00000119019 712 ntBASIC20.21■□□□□ 0.83
Slx4Q6P1D7 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slx4Q6P1D7 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Slx4Q6P1D7 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC20.21■□□□□ 0.83
Slx4Q6P1D7 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC20.21■□□□□ 0.83
Slx4Q6P1D7 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC20.21■□□□□ 0.83
Slx4Q6P1D7 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Slx4Q6P1D7 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Slx4Q6P1D7 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slx4Q6P1D7 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slx4Q6P1D7 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Slx4Q6P1D7 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Slx4Q6P1D7 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC20.21■□□□□ 0.83
Slx4Q6P1D7 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Slx4Q6P1D7 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Slx4Q6P1D7 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slx4Q6P1D7 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Slx4Q6P1D7 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Slx4Q6P1D7 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Slx4Q6P1D7 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Slx4Q6P1D7 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC20.21■□□□□ 0.83
Slx4Q6P1D7 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC20.21■□□□□ 0.83
Slx4Q6P1D7 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slx4Q6P1D7 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Slx4Q6P1D7 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slx4Q6P1D7 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slx4Q6P1D7 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Slx4Q6P1D7 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slx4Q6P1D7 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slx4Q6P1D7 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slx4Q6P1D7 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Slx4Q6P1D7 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slx4Q6P1D7 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slx4Q6P1D7 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
Slx4Q6P1D7 Gm13296-201ENSMUST00000117854 997 ntBASIC20.2■□□□□ 0.82
Slx4Q6P1D7 Gm11597-201ENSMUST00000121423 964 ntBASIC20.2■□□□□ 0.82
Slx4Q6P1D7 Spcs1-203ENSMUST00000226374 592 ntBASIC20.2■□□□□ 0.82
Slx4Q6P1D7 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Slx4Q6P1D7 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Slx4Q6P1D7 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC20.2■□□□□ 0.82
Slx4Q6P1D7 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC20.2■□□□□ 0.82
Slx4Q6P1D7 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slx4Q6P1D7 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slx4Q6P1D7 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slx4Q6P1D7 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slx4Q6P1D7 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Slx4Q6P1D7 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Slx4Q6P1D7 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Slx4Q6P1D7 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Slx4Q6P1D7 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Slx4Q6P1D7 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Slx4Q6P1D7 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Slx4Q6P1D7 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Slx4Q6P1D7 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Slx4Q6P1D7 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Slx4Q6P1D7 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Slx4Q6P1D7 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC20.19■□□□□ 0.82
Slx4Q6P1D7 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC20.19■□□□□ 0.82
Slx4Q6P1D7 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Slx4Q6P1D7 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC20.19■□□□□ 0.82
Slx4Q6P1D7 Ighv8-10-201ENSMUST00000199579 358 ntBASIC20.19■□□□□ 0.82
Slx4Q6P1D7 Gzmn-202ENSMUST00000225535 989 ntBASIC20.19■□□□□ 0.82
Slx4Q6P1D7 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Slx4Q6P1D7 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Slx4Q6P1D7 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Slx4Q6P1D7 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Slx4Q6P1D7 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Slx4Q6P1D7 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Slx4Q6P1D7 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
Slx4Q6P1D7 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Slx4Q6P1D7 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Slx4Q6P1D7 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Slx4Q6P1D7 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slx4Q6P1D7 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slx4Q6P1D7 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slx4Q6P1D7 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
Slx4Q6P1D7 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slx4Q6P1D7 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slx4Q6P1D7 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC20.18■□□□□ 0.82
Slx4Q6P1D7 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Slx4Q6P1D7 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slx4Q6P1D7 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slx4Q6P1D7 Gm11667-201ENSMUST00000119828 486 ntBASIC20.18■□□□□ 0.82
Slx4Q6P1D7 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC20.18■□□□□ 0.82
Slx4Q6P1D7 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Slx4Q6P1D7 Gm45433-201ENSMUST00000209386 247 ntBASIC20.18■□□□□ 0.82
Slx4Q6P1D7 AC154276.3-201ENSMUST00000227643 998 ntBASIC20.18■□□□□ 0.82
Slx4Q6P1D7 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Slx4Q6P1D7 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Slx4Q6P1D7 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms