Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Sp140Q6NSQ5 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sp140Q6NSQ5 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sp140Q6NSQ5 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sp140Q6NSQ5 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
Sp140Q6NSQ5 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sp140Q6NSQ5 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Sp140Q6NSQ5 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sp140Q6NSQ5 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Sp140Q6NSQ5 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.59□□□□□ -0.23
Sp140Q6NSQ5 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.59□□□□□ -0.23
Sp140Q6NSQ5 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sp140Q6NSQ5 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Sp140Q6NSQ5 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.59□□□□□ -0.23
Sp140Q6NSQ5 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.59□□□□□ -0.23
Sp140Q6NSQ5 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sp140Q6NSQ5 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sp140Q6NSQ5 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sp140Q6NSQ5 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.59□□□□□ -0.23
Sp140Q6NSQ5 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Sp140Q6NSQ5 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sp140Q6NSQ5 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sp140Q6NSQ5 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sp140Q6NSQ5 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sp140Q6NSQ5 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sp140Q6NSQ5 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sp140Q6NSQ5 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Sp140Q6NSQ5 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sp140Q6NSQ5 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sp140Q6NSQ5 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sp140Q6NSQ5 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Sp140Q6NSQ5 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sp140Q6NSQ5 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Sp140Q6NSQ5 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Sp140Q6NSQ5 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Sp140Q6NSQ5 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.58□□□□□ -0.24
Sp140Q6NSQ5 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sp140Q6NSQ5 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sp140Q6NSQ5 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.58□□□□□ -0.24
Sp140Q6NSQ5 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Sp140Q6NSQ5 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sp140Q6NSQ5 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sp140Q6NSQ5 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sp140Q6NSQ5 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sp140Q6NSQ5 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sp140Q6NSQ5 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Sp140Q6NSQ5 Gm11524-201ENSMUST00000119349 807 ntBASIC13.58□□□□□ -0.24
Sp140Q6NSQ5 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.58□□□□□ -0.24
Sp140Q6NSQ5 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.58□□□□□ -0.24
Sp140Q6NSQ5 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.58□□□□□ -0.24
Sp140Q6NSQ5 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.58□□□□□ -0.24
Sp140Q6NSQ5 Gm6218-201ENSMUST00000219812 628 ntBASIC13.58□□□□□ -0.24
Sp140Q6NSQ5 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.58□□□□□ -0.24
Sp140Q6NSQ5 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sp140Q6NSQ5 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.58□□□□□ -0.24
Sp140Q6NSQ5 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Sp140Q6NSQ5 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.58□□□□□ -0.24
Sp140Q6NSQ5 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Sp140Q6NSQ5 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Sp140Q6NSQ5 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Sp140Q6NSQ5 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sp140Q6NSQ5 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.58□□□□□ -0.24
Sp140Q6NSQ5 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sp140Q6NSQ5 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Sp140Q6NSQ5 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sp140Q6NSQ5 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sp140Q6NSQ5 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Sp140Q6NSQ5 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sp140Q6NSQ5 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Sp140Q6NSQ5 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sp140Q6NSQ5 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sp140Q6NSQ5 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sp140Q6NSQ5 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.58□□□□□ -0.24
Sp140Q6NSQ5 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sp140Q6NSQ5 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Sp140Q6NSQ5 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sp140Q6NSQ5 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.57□□□□□ -0.24
Sp140Q6NSQ5 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sp140Q6NSQ5 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sp140Q6NSQ5 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.57□□□□□ -0.24
Sp140Q6NSQ5 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sp140Q6NSQ5 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC13.57□□□□□ -0.24
Sp140Q6NSQ5 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.57□□□□□ -0.24
Sp140Q6NSQ5 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sp140Q6NSQ5 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sp140Q6NSQ5 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.57□□□□□ -0.24
Sp140Q6NSQ5 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sp140Q6NSQ5 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sp140Q6NSQ5 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sp140Q6NSQ5 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
Sp140Q6NSQ5 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sp140Q6NSQ5 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sp140Q6NSQ5 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Sp140Q6NSQ5 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sp140Q6NSQ5 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sp140Q6NSQ5 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sp140Q6NSQ5 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Sp140Q6NSQ5 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Sp140Q6NSQ5 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Sp140Q6NSQ5 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms