Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
VclQ64727 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VclQ64727 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VclQ64727 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VclQ64727 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VclQ64727 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
VclQ64727 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
VclQ64727 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.16□□□□□ -0.3
VclQ64727 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VclQ64727 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.16□□□□□ -0.3
VclQ64727 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VclQ64727 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VclQ64727 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
VclQ64727 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
VclQ64727 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
VclQ64727 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VclQ64727 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VclQ64727 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VclQ64727 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VclQ64727 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
VclQ64727 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
VclQ64727 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
VclQ64727 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VclQ64727 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
VclQ64727 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.15□□□□□ -0.3
VclQ64727 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
VclQ64727 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.15□□□□□ -0.3
VclQ64727 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VclQ64727 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
VclQ64727 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.15□□□□□ -0.3
VclQ64727 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
VclQ64727 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
VclQ64727 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.15□□□□□ -0.3
VclQ64727 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.15□□□□□ -0.3
VclQ64727 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
VclQ64727 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VclQ64727 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VclQ64727 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
VclQ64727 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
VclQ64727 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VclQ64727 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.15□□□□□ -0.3
VclQ64727 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VclQ64727 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VclQ64727 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VclQ64727 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
VclQ64727 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
VclQ64727 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
VclQ64727 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
VclQ64727 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
VclQ64727 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
VclQ64727 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
VclQ64727 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
VclQ64727 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
VclQ64727 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VclQ64727 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VclQ64727 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VclQ64727 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
VclQ64727 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
VclQ64727 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
VclQ64727 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VclQ64727 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
VclQ64727 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VclQ64727 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VclQ64727 Matn2-206ENSMUST00000228570 2798 ntBASIC13.14□□□□□ -0.31
VclQ64727 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.14□□□□□ -0.31
VclQ64727 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.14□□□□□ -0.31
VclQ64727 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.14□□□□□ -0.31
VclQ64727 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.14□□□□□ -0.31
VclQ64727 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.14□□□□□ -0.31
VclQ64727 Gm12403-201ENSMUST00000121384 959 ntBASIC13.14□□□□□ -0.31
VclQ64727 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
VclQ64727 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.14□□□□□ -0.31
VclQ64727 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.14□□□□□ -0.31
VclQ64727 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.14□□□□□ -0.31
VclQ64727 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
VclQ64727 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
VclQ64727 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
VclQ64727 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VclQ64727 Gm6244-201ENSMUST00000178732 841 ntBASIC13.14□□□□□ -0.31
VclQ64727 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.14□□□□□ -0.31
VclQ64727 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.14□□□□□ -0.31
VclQ64727 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.14□□□□□ -0.31
VclQ64727 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.14□□□□□ -0.31
VclQ64727 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
VclQ64727 Gm38671-201ENSMUST00000200573 130 ntBASIC13.14□□□□□ -0.31
VclQ64727 Gm8463-201ENSMUST00000208573 613 ntBASIC13.14□□□□□ -0.31
VclQ64727 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.14□□□□□ -0.31
VclQ64727 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VclQ64727 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VclQ64727 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VclQ64727 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
VclQ64727 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VclQ64727 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VclQ64727 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VclQ64727 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
VclQ64727 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
VclQ64727 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VclQ64727 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
VclQ64727 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
VclQ64727 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms