Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Gm7118-201ENSMUST00000200167 1003 ntBASIC16.94■□□□□ 0.3
Clcn1Q64347 Gm43416-201ENSMUST00000201916 1015 ntBASIC16.94■□□□□ 0.3
Clcn1Q64347 CT485787.1-201ENSMUST00000225617 968 ntBASIC16.94■□□□□ 0.3
Clcn1Q64347 AC134335.2-201ENSMUST00000227660 440 ntBASIC16.94■□□□□ 0.3
Clcn1Q64347 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clcn1Q64347 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Clcn1Q64347 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC16.94■□□□□ 0.3
Clcn1Q64347 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
Clcn1Q64347 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clcn1Q64347 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clcn1Q64347 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clcn1Q64347 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Clcn1Q64347 Gm43570-201ENSMUST00000199951 3688 ntBASIC16.94■□□□□ 0.3
Clcn1Q64347 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clcn1Q64347 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clcn1Q64347 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clcn1Q64347 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clcn1Q64347 Gm42769-201ENSMUST00000198576 1659 ntBASIC16.94■□□□□ 0.3
Clcn1Q64347 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clcn1Q64347 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Clcn1Q64347 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clcn1Q64347 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clcn1Q64347 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Clcn1Q64347 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clcn1Q64347 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC16.93■□□□□ 0.3
Clcn1Q64347 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clcn1Q64347 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clcn1Q64347 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clcn1Q64347 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clcn1Q64347 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clcn1Q64347 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clcn1Q64347 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clcn1Q64347 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clcn1Q64347 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Clcn1Q64347 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clcn1Q64347 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Clcn1Q64347 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Clcn1Q64347 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Clcn1Q64347 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC16.93■□□□□ 0.3
Clcn1Q64347 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Clcn1Q64347 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
Clcn1Q64347 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Clcn1Q64347 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clcn1Q64347 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Clcn1Q64347 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clcn1Q64347 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clcn1Q64347 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Clcn1Q64347 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clcn1Q64347 Gm14608-201ENSMUST00000120030 1553 ntBASIC16.93■□□□□ 0.3
Clcn1Q64347 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clcn1Q64347 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Clcn1Q64347 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Clcn1Q64347 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clcn1Q64347 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clcn1Q64347 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Clcn1Q64347 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Clcn1Q64347 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clcn1Q64347 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Clcn1Q64347 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Clcn1Q64347 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clcn1Q64347 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clcn1Q64347 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clcn1Q64347 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
Clcn1Q64347 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Clcn1Q64347 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Clcn1Q64347 Gm43423-201ENSMUST00000198390 2094 ntBASIC16.92■□□□□ 0.3
Clcn1Q64347 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clcn1Q64347 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clcn1Q64347 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clcn1Q64347 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clcn1Q64347 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Clcn1Q64347 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Clcn1Q64347 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC16.92■□□□□ 0.3
Clcn1Q64347 Gm29396-201ENSMUST00000185659 716 ntBASIC16.92■□□□□ 0.3
Clcn1Q64347 Gm37259-201ENSMUST00000193903 849 ntBASIC16.92■□□□□ 0.3
Clcn1Q64347 Gm44364-201ENSMUST00000198368 141 ntBASIC16.92■□□□□ 0.3
Clcn1Q64347 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC16.92■□□□□ 0.3
Clcn1Q64347 AC134254.1-201ENSMUST00000221362 167 ntBASIC16.92■□□□□ 0.3
Clcn1Q64347 Gm8227-201ENSMUST00000223306 571 ntBASIC16.92■□□□□ 0.3
Clcn1Q64347 AC154462.2-201ENSMUST00000227519 370 ntBASIC16.92■□□□□ 0.3
Clcn1Q64347 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Clcn1Q64347 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clcn1Q64347 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clcn1Q64347 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clcn1Q64347 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Clcn1Q64347 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.92■□□□□ 0.3
Clcn1Q64347 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clcn1Q64347 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Clcn1Q64347 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Clcn1Q64347 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Clcn1Q64347 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Clcn1Q64347 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn1Q64347 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn1Q64347 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC16.91■□□□□ 0.3
Clcn1Q64347 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC16.91■□□□□ 0.3
Clcn1Q64347 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC16.91■□□□□ 0.3
Clcn1Q64347 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC16.91■□□□□ 0.3
Clcn1Q64347 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn1Q64347 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Clcn1Q64347 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms