Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Gm23153-201ENSMUST00000175323 313 ntBASIC12.35□□□□□ -0.43
AtmQ62388 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.35□□□□□ -0.43
AtmQ62388 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC12.35□□□□□ -0.43
AtmQ62388 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.35□□□□□ -0.43
AtmQ62388 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AtmQ62388 AC166992.1-201ENSMUST00000216356 565 ntBASIC12.35□□□□□ -0.43
AtmQ62388 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AtmQ62388 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
AtmQ62388 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AtmQ62388 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
AtmQ62388 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
AtmQ62388 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AtmQ62388 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AtmQ62388 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AtmQ62388 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AtmQ62388 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AtmQ62388 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.35□□□□□ -0.43
AtmQ62388 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AtmQ62388 Mir1901-201ENSMUST00000122616 78 ntBASIC12.35□□□□□ -0.43
AtmQ62388 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.35□□□□□ -0.43
AtmQ62388 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC12.35□□□□□ -0.43
AtmQ62388 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AtmQ62388 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AtmQ62388 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AtmQ62388 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
AtmQ62388 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AtmQ62388 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AtmQ62388 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.35□□□□□ -0.43
AtmQ62388 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AtmQ62388 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
AtmQ62388 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
AtmQ62388 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
AtmQ62388 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.35□□□□□ -0.43
AtmQ62388 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AtmQ62388 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.34□□□□□ -0.43
AtmQ62388 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.34□□□□□ -0.43
AtmQ62388 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AtmQ62388 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
AtmQ62388 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
AtmQ62388 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
AtmQ62388 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC12.34□□□□□ -0.43
AtmQ62388 Gm11930-201ENSMUST00000117788 190 ntBASIC12.34□□□□□ -0.43
AtmQ62388 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
AtmQ62388 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
AtmQ62388 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
AtmQ62388 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AtmQ62388 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
AtmQ62388 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
AtmQ62388 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AtmQ62388 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
AtmQ62388 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
AtmQ62388 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AtmQ62388 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
AtmQ62388 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.34□□□□□ -0.43
AtmQ62388 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
AtmQ62388 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AtmQ62388 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC12.34□□□□□ -0.43
AtmQ62388 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AtmQ62388 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.34□□□□□ -0.43
AtmQ62388 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AtmQ62388 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
AtmQ62388 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
AtmQ62388 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.34□□□□□ -0.43
AtmQ62388 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.34□□□□□ -0.43
AtmQ62388 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC12.34□□□□□ -0.43
AtmQ62388 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AtmQ62388 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.34□□□□□ -0.43
AtmQ62388 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AtmQ62388 Gm15515-201ENSMUST00000117827 822 ntBASIC12.34□□□□□ -0.43
AtmQ62388 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.34□□□□□ -0.43
AtmQ62388 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
AtmQ62388 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AtmQ62388 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
AtmQ62388 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
AtmQ62388 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
AtmQ62388 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
AtmQ62388 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
AtmQ62388 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
AtmQ62388 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.33□□□□□ -0.44
AtmQ62388 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
AtmQ62388 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.33□□□□□ -0.44
AtmQ62388 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
AtmQ62388 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
AtmQ62388 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC12.33□□□□□ -0.44
AtmQ62388 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
AtmQ62388 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.33□□□□□ -0.44
AtmQ62388 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.33□□□□□ -0.44
AtmQ62388 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
AtmQ62388 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
AtmQ62388 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
AtmQ62388 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
AtmQ62388 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
AtmQ62388 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
AtmQ62388 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
AtmQ62388 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
AtmQ62388 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
AtmQ62388 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
AtmQ62388 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
AtmQ62388 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
AtmQ62388 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms