Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ift88Q61371 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Ift88Q61371 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC14.82□□□□□ -0.04
Ift88Q61371 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.82□□□□□ -0.04
Ift88Q61371 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.82□□□□□ -0.04
Ift88Q61371 Gm14767-201ENSMUST00000121559 586 ntBASIC14.82□□□□□ -0.04
Ift88Q61371 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ift88Q61371 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ift88Q61371 Gm27680-201ENSMUST00000184192 160 ntBASIC14.82□□□□□ -0.04
Ift88Q61371 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.82□□□□□ -0.04
Ift88Q61371 Gm38294-201ENSMUST00000192831 381 ntBASIC14.82□□□□□ -0.04
Ift88Q61371 Gm18905-201ENSMUST00000205454 928 ntBASIC14.82□□□□□ -0.04
Ift88Q61371 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.82□□□□□ -0.04
Ift88Q61371 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.82□□□□□ -0.04
Ift88Q61371 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ift88Q61371 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ift88Q61371 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ift88Q61371 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ift88Q61371 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Ift88Q61371 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ift88Q61371 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ift88Q61371 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ift88Q61371 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Ift88Q61371 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ift88Q61371 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ift88Q61371 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Ift88Q61371 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.82□□□□□ -0.04
Ift88Q61371 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.82□□□□□ -0.04
Ift88Q61371 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ift88Q61371 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ift88Q61371 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ift88Q61371 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ift88Q61371 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ift88Q61371 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ift88Q61371 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ift88Q61371 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ift88Q61371 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC14.81□□□□□ -0.04
Ift88Q61371 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ift88Q61371 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ift88Q61371 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ift88Q61371 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ift88Q61371 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ift88Q61371 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.81□□□□□ -0.04
Ift88Q61371 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ift88Q61371 Gm27772-201ENSMUST00000184900 187 ntBASIC14.81□□□□□ -0.04
Ift88Q61371 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ift88Q61371 Gm6888-201ENSMUST00000221983 706 ntBASIC14.81□□□□□ -0.04
Ift88Q61371 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.81□□□□□ -0.04
Ift88Q61371 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ift88Q61371 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ift88Q61371 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Ift88Q61371 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ift88Q61371 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.81□□□□□ -0.04
Ift88Q61371 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ift88Q61371 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ift88Q61371 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ift88Q61371 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ift88Q61371 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ift88Q61371 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ift88Q61371 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ift88Q61371 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Ift88Q61371 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ift88Q61371 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.8□□□□□ -0.04
Ift88Q61371 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ift88Q61371 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Ift88Q61371 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ift88Q61371 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ift88Q61371 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ift88Q61371 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Ift88Q61371 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ift88Q61371 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ift88Q61371 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ift88Q61371 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
Ift88Q61371 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Ift88Q61371 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ift88Q61371 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.8□□□□□ -0.04
Ift88Q61371 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.8□□□□□ -0.04
Ift88Q61371 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.8□□□□□ -0.04
Ift88Q61371 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ift88Q61371 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Ift88Q61371 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.8□□□□□ -0.04
Ift88Q61371 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ift88Q61371 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ift88Q61371 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.8□□□□□ -0.04
Ift88Q61371 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ift88Q61371 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ift88Q61371 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ift88Q61371 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Ift88Q61371 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ift88Q61371 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ift88Q61371 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ift88Q61371 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ift88Q61371 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ift88Q61371 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ift88Q61371 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Ift88Q61371 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ift88Q61371 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ift88Q61371 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ift88Q61371 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ift88Q61371 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms