Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a4Q60857 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a4Q60857 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.68□□□□□ -0.22
Slc6a4Q60857 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.68□□□□□ -0.22
Slc6a4Q60857 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a4Q60857 Gm16372-201ENSMUST00000073088 450 ntBASIC13.68□□□□□ -0.22
Slc6a4Q60857 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a4Q60857 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a4Q60857 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a4Q60857 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a4Q60857 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Slc6a4Q60857 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.68□□□□□ -0.22
Slc6a4Q60857 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a4Q60857 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.68□□□□□ -0.22
Slc6a4Q60857 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a4Q60857 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.68□□□□□ -0.22
Slc6a4Q60857 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a4Q60857 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Slc6a4Q60857 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a4Q60857 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Slc6a4Q60857 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Slc6a4Q60857 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Slc6a4Q60857 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc6a4Q60857 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Slc6a4Q60857 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Slc6a4Q60857 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.67□□□□□ -0.22
Slc6a4Q60857 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc6a4Q60857 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.67□□□□□ -0.22
Slc6a4Q60857 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC13.67□□□□□ -0.22
Slc6a4Q60857 Gm23931-201ENSMUST00000103842 109 ntBASIC13.67□□□□□ -0.22
Slc6a4Q60857 Gm12742-201ENSMUST00000117326 410 ntBASIC13.67□□□□□ -0.22
Slc6a4Q60857 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Slc6a4Q60857 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Slc6a4Q60857 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.67□□□□□ -0.22
Slc6a4Q60857 Gm8062-201ENSMUST00000139696 444 ntBASIC13.67□□□□□ -0.22
Slc6a4Q60857 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.67□□□□□ -0.22
Slc6a4Q60857 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Slc6a4Q60857 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc6a4Q60857 Gm27682-201ENSMUST00000183930 110 ntBASIC13.67□□□□□ -0.22
Slc6a4Q60857 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Slc6a4Q60857 Gm37424-201ENSMUST00000191727 561 ntBASIC13.67□□□□□ -0.22
Slc6a4Q60857 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.67□□□□□ -0.22
Slc6a4Q60857 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc6a4Q60857 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.67□□□□□ -0.22
Slc6a4Q60857 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc6a4Q60857 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc6a4Q60857 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc6a4Q60857 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Slc6a4Q60857 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc6a4Q60857 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Slc6a4Q60857 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Slc6a4Q60857 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc6a4Q60857 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.67□□□□□ -0.22
Slc6a4Q60857 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc6a4Q60857 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc6a4Q60857 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc6a4Q60857 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc6a4Q60857 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Slc6a4Q60857 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc6a4Q60857 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc6a4Q60857 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.66□□□□□ -0.22
Slc6a4Q60857 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc6a4Q60857 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Slc6a4Q60857 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc6a4Q60857 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc6a4Q60857 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc6a4Q60857 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Slc6a4Q60857 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Slc6a4Q60857 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.66□□□□□ -0.22
Slc6a4Q60857 Gm16202-201ENSMUST00000117532 544 ntBASIC13.66□□□□□ -0.22
Slc6a4Q60857 Gm1335-201ENSMUST00000121653 386 ntBASIC13.66□□□□□ -0.22
Slc6a4Q60857 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Slc6a4Q60857 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.66□□□□□ -0.22
Slc6a4Q60857 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc6a4Q60857 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.66□□□□□ -0.22
Slc6a4Q60857 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.66□□□□□ -0.22
Slc6a4Q60857 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc6a4Q60857 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Slc6a4Q60857 Gm10146-201ENSMUST00000072739 309 ntBASIC13.66□□□□□ -0.22
Slc6a4Q60857 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Slc6a4Q60857 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc6a4Q60857 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc6a4Q60857 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc6a4Q60857 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.66□□□□□ -0.22
Slc6a4Q60857 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.66□□□□□ -0.22
Slc6a4Q60857 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc6a4Q60857 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc6a4Q60857 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Slc6a4Q60857 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc6a4Q60857 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc6a4Q60857 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc6a4Q60857 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Slc6a4Q60857 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.66□□□□□ -0.22
Slc6a4Q60857 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc6a4Q60857 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Slc6a4Q60857 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc6a4Q60857 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Slc6a4Q60857 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc6a4Q60857 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Slc6a4Q60857 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms