Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.77□□□□□ -0.37
Nr1h4Q60641 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nr1h4Q60641 Gm43474-201ENSMUST00000196415 774 ntBASIC12.77□□□□□ -0.37
Nr1h4Q60641 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nr1h4Q60641 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nr1h4Q60641 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nr1h4Q60641 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nr1h4Q60641 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nr1h4Q60641 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nr1h4Q60641 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Nr1h4Q60641 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nr1h4Q60641 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.77□□□□□ -0.37
Nr1h4Q60641 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nr1h4Q60641 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.77□□□□□ -0.37
Nr1h4Q60641 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Nr1h4Q60641 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nr1h4Q60641 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nr1h4Q60641 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nr1h4Q60641 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.77□□□□□ -0.37
Nr1h4Q60641 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nr1h4Q60641 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Nr1h4Q60641 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nr1h4Q60641 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.77□□□□□ -0.37
Nr1h4Q60641 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nr1h4Q60641 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nr1h4Q60641 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nr1h4Q60641 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nr1h4Q60641 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nr1h4Q60641 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nr1h4Q60641 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nr1h4Q60641 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nr1h4Q60641 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nr1h4Q60641 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nr1h4Q60641 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nr1h4Q60641 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nr1h4Q60641 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Nr1h4Q60641 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nr1h4Q60641 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nr1h4Q60641 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Nr1h4Q60641 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nr1h4Q60641 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nr1h4Q60641 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Nr1h4Q60641 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nr1h4Q60641 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.76□□□□□ -0.37
Nr1h4Q60641 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nr1h4Q60641 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nr1h4Q60641 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nr1h4Q60641 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nr1h4Q60641 Gm9229-201ENSMUST00000222777 126 ntBASIC12.76□□□□□ -0.37
Nr1h4Q60641 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nr1h4Q60641 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Nr1h4Q60641 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Nr1h4Q60641 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nr1h4Q60641 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Nr1h4Q60641 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nr1h4Q60641 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Nr1h4Q60641 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nr1h4Q60641 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.76□□□□□ -0.37
Nr1h4Q60641 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Nr1h4Q60641 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nr1h4Q60641 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nr1h4Q60641 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nr1h4Q60641 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.76□□□□□ -0.37
Nr1h4Q60641 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.76□□□□□ -0.37
Nr1h4Q60641 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nr1h4Q60641 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nr1h4Q60641 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.76□□□□□ -0.37
Nr1h4Q60641 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nr1h4Q60641 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nr1h4Q60641 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.76□□□□□ -0.37
Nr1h4Q60641 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Nr1h4Q60641 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.75□□□□□ -0.37
Nr1h4Q60641 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Nr1h4Q60641 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nr1h4Q60641 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Nr1h4Q60641 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.75□□□□□ -0.37
Nr1h4Q60641 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nr1h4Q60641 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.75□□□□□ -0.37
Nr1h4Q60641 Gm15678-201ENSMUST00000117573 960 ntBASIC12.75□□□□□ -0.37
Nr1h4Q60641 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nr1h4Q60641 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nr1h4Q60641 Gm15393-201ENSMUST00000120499 219 ntBASIC12.75□□□□□ -0.37
Nr1h4Q60641 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.75□□□□□ -0.37
Nr1h4Q60641 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.75□□□□□ -0.37
Nr1h4Q60641 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.75□□□□□ -0.37
Nr1h4Q60641 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nr1h4Q60641 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nr1h4Q60641 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Nr1h4Q60641 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Nr1h4Q60641 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Nr1h4Q60641 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Nr1h4Q60641 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Nr1h4Q60641 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.75□□□□□ -0.37
Nr1h4Q60641 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nr1h4Q60641 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nr1h4Q60641 Gm44335-201ENSMUST00000196879 141 ntBASIC12.75□□□□□ -0.37
Nr1h4Q60641 Gm44297-201ENSMUST00000198304 141 ntBASIC12.75□□□□□ -0.37
Nr1h4Q60641 Gm44346-201ENSMUST00000198851 141 ntBASIC12.75□□□□□ -0.37
Nr1h4Q60641 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nr1h4Q60641 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms