Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav5d-4Q5R1F6 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trav5d-4Q5R1F6 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav5d-4Q5R1F6 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav5d-4Q5R1F6 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav5d-4Q5R1F6 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trav5d-4Q5R1F6 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trav5d-4Q5R1F6 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav5d-4Q5R1F6 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav5d-4Q5R1F6 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trav5d-4Q5R1F6 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trav5d-4Q5R1F6 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav5d-4Q5R1F6 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav5d-4Q5R1F6 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
Trav5d-4Q5R1F6 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Trav5d-4Q5R1F6 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav5d-4Q5R1F6 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav5d-4Q5R1F6 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav5d-4Q5R1F6 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav5d-4Q5R1F6 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav5d-4Q5R1F6 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav5d-4Q5R1F6 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC11.51□□□□□ -0.57
Trav5d-4Q5R1F6 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav5d-4Q5R1F6 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trav5d-4Q5R1F6 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.51□□□□□ -0.57
Trav5d-4Q5R1F6 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav5d-4Q5R1F6 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav5d-4Q5R1F6 Gm14057-201ENSMUST00000120631 482 ntBASIC11.51□□□□□ -0.57
Trav5d-4Q5R1F6 Gm15321-201ENSMUST00000121290 288 ntBASIC11.51□□□□□ -0.57
Trav5d-4Q5R1F6 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
Trav5d-4Q5R1F6 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav5d-4Q5R1F6 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Trav5d-4Q5R1F6 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trav5d-4Q5R1F6 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC11.51□□□□□ -0.57
Trav5d-4Q5R1F6 Gm28760-201ENSMUST00000185995 736 ntBASIC11.51□□□□□ -0.57
Trav5d-4Q5R1F6 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC11.51□□□□□ -0.57
Trav5d-4Q5R1F6 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trav5d-4Q5R1F6 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav5d-4Q5R1F6 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav5d-4Q5R1F6 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav5d-4Q5R1F6 Syt7-204ENSMUST00000223586 1344 ntBASIC11.51□□□□□ -0.57
Trav5d-4Q5R1F6 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav5d-4Q5R1F6 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav5d-4Q5R1F6 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav5d-4Q5R1F6 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC11.51□□□□□ -0.57
Trav5d-4Q5R1F6 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav5d-4Q5R1F6 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav5d-4Q5R1F6 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav5d-4Q5R1F6 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav5d-4Q5R1F6 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav5d-4Q5R1F6 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trav5d-4Q5R1F6 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.51□□□□□ -0.57
Trav5d-4Q5R1F6 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trav5d-4Q5R1F6 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav5d-4Q5R1F6 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav5d-4Q5R1F6 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.5□□□□□ -0.57
Trav5d-4Q5R1F6 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav5d-4Q5R1F6 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav5d-4Q5R1F6 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav5d-4Q5R1F6 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav5d-4Q5R1F6 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav5d-4Q5R1F6 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav5d-4Q5R1F6 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav5d-4Q5R1F6 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav5d-4Q5R1F6 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Trav5d-4Q5R1F6 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Trav5d-4Q5R1F6 Gm12485-201ENSMUST00000119641 291 ntBASIC11.5□□□□□ -0.57
Trav5d-4Q5R1F6 Gm43094-201ENSMUST00000196549 921 ntBASIC11.5□□□□□ -0.57
Trav5d-4Q5R1F6 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC11.5□□□□□ -0.57
Trav5d-4Q5R1F6 Gm5279-201ENSMUST00000199575 745 ntBASIC11.5□□□□□ -0.57
Trav5d-4Q5R1F6 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trav5d-4Q5R1F6 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav5d-4Q5R1F6 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav5d-4Q5R1F6 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav5d-4Q5R1F6 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav5d-4Q5R1F6 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav5d-4Q5R1F6 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav5d-4Q5R1F6 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav5d-4Q5R1F6 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Trav5d-4Q5R1F6 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trav5d-4Q5R1F6 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav5d-4Q5R1F6 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav5d-4Q5R1F6 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trav5d-4Q5R1F6 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.5□□□□□ -0.57
Trav5d-4Q5R1F6 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav5d-4Q5R1F6 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Trav5d-4Q5R1F6 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav5d-4Q5R1F6 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav5d-4Q5R1F6 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
Trav5d-4Q5R1F6 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav5d-4Q5R1F6 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav5d-4Q5R1F6 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav5d-4Q5R1F6 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav5d-4Q5R1F6 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav5d-4Q5R1F6 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav5d-4Q5R1F6 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav5d-4Q5R1F6 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav5d-4Q5R1F6 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trav5d-4Q5R1F6 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Trav5d-4Q5R1F6 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms