Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Vps13aQ5H8C4 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps13aQ5H8C4 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps13aQ5H8C4 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Vps13aQ5H8C4 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps13aQ5H8C4 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps13aQ5H8C4 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Vps13aQ5H8C4 Gm15432-201ENSMUST00000121106 195 ntBASIC12.92□□□□□ -0.34
Vps13aQ5H8C4 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vps13aQ5H8C4 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC12.92□□□□□ -0.34
Vps13aQ5H8C4 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vps13aQ5H8C4 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vps13aQ5H8C4 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps13aQ5H8C4 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps13aQ5H8C4 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.92□□□□□ -0.34
Vps13aQ5H8C4 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps13aQ5H8C4 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps13aQ5H8C4 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vps13aQ5H8C4 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps13aQ5H8C4 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps13aQ5H8C4 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vps13aQ5H8C4 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps13aQ5H8C4 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.92□□□□□ -0.34
Vps13aQ5H8C4 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vps13aQ5H8C4 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.92□□□□□ -0.34
Vps13aQ5H8C4 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps13aQ5H8C4 Gm23251-201ENSMUST00000103773 110 ntBASIC12.92□□□□□ -0.34
Vps13aQ5H8C4 Gm23949-201ENSMUST00000104027 127 ntBASIC12.92□□□□□ -0.34
Vps13aQ5H8C4 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.92□□□□□ -0.34
Vps13aQ5H8C4 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.92□□□□□ -0.34
Vps13aQ5H8C4 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.92□□□□□ -0.34
Vps13aQ5H8C4 Gm7902-201ENSMUST00000198842 947 ntBASIC12.92□□□□□ -0.34
Vps13aQ5H8C4 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.92□□□□□ -0.34
Vps13aQ5H8C4 CT009713.8-201ENSMUST00000225448 560 ntBASIC12.92□□□□□ -0.34
Vps13aQ5H8C4 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps13aQ5H8C4 Gm9873-201ENSMUST00000063891 1097 ntBASIC12.92□□□□□ -0.34
Vps13aQ5H8C4 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps13aQ5H8C4 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Vps13aQ5H8C4 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Vps13aQ5H8C4 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Vps13aQ5H8C4 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps13aQ5H8C4 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps13aQ5H8C4 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps13aQ5H8C4 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps13aQ5H8C4 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC12.91□□□□□ -0.34
Vps13aQ5H8C4 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC12.91□□□□□ -0.34
Vps13aQ5H8C4 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps13aQ5H8C4 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.91□□□□□ -0.34
Vps13aQ5H8C4 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vps13aQ5H8C4 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC12.91□□□□□ -0.34
Vps13aQ5H8C4 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps13aQ5H8C4 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps13aQ5H8C4 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps13aQ5H8C4 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps13aQ5H8C4 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps13aQ5H8C4 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Vps13aQ5H8C4 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps13aQ5H8C4 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps13aQ5H8C4 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps13aQ5H8C4 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC12.91□□□□□ -0.34
Vps13aQ5H8C4 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps13aQ5H8C4 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Vps13aQ5H8C4 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.91□□□□□ -0.34
Vps13aQ5H8C4 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps13aQ5H8C4 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps13aQ5H8C4 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.91□□□□□ -0.34
Vps13aQ5H8C4 AC156501.1-201ENSMUST00000228219 270 ntBASIC12.91□□□□□ -0.34
Vps13aQ5H8C4 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps13aQ5H8C4 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps13aQ5H8C4 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.91□□□□□ -0.34
Vps13aQ5H8C4 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vps13aQ5H8C4 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Vps13aQ5H8C4 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Vps13aQ5H8C4 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vps13aQ5H8C4 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.91□□□□□ -0.34
Vps13aQ5H8C4 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.91□□□□□ -0.34
Vps13aQ5H8C4 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC12.91□□□□□ -0.34
Vps13aQ5H8C4 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vps13aQ5H8C4 Prrxl1-205ENSMUST00000228878 723 ntBASIC12.91□□□□□ -0.34
Vps13aQ5H8C4 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps13aQ5H8C4 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps13aQ5H8C4 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.91□□□□□ -0.34
Vps13aQ5H8C4 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps13aQ5H8C4 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps13aQ5H8C4 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps13aQ5H8C4 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps13aQ5H8C4 Mir671-201ENSMUST00000102432 98 ntBASIC12.9□□□□□ -0.34
Vps13aQ5H8C4 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.9□□□□□ -0.34
Vps13aQ5H8C4 Gm11354-201ENSMUST00000121974 422 ntBASIC12.9□□□□□ -0.34
Vps13aQ5H8C4 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.9□□□□□ -0.34
Vps13aQ5H8C4 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Vps13aQ5H8C4 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC12.9□□□□□ -0.34
Vps13aQ5H8C4 Gm6867-201ENSMUST00000219165 425 ntBASIC12.9□□□□□ -0.34
Vps13aQ5H8C4 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Vps13aQ5H8C4 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.9□□□□□ -0.34
Vps13aQ5H8C4 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Vps13aQ5H8C4 Gm9387-201ENSMUST00000098624 1320 ntBASIC12.9□□□□□ -0.34
Vps13aQ5H8C4 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
Vps13aQ5H8C4 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.9□□□□□ -0.34
Vps13aQ5H8C4 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms