Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Nlrc4Q3UP24 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Nlrc4Q3UP24 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nlrc4Q3UP24 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.09□□□□□ -0.15
Nlrc4Q3UP24 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Nlrc4Q3UP24 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nlrc4Q3UP24 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nlrc4Q3UP24 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Nlrc4Q3UP24 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Nlrc4Q3UP24 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Nlrc4Q3UP24 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nlrc4Q3UP24 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.08□□□□□ -0.15
Nlrc4Q3UP24 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Nlrc4Q3UP24 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nlrc4Q3UP24 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nlrc4Q3UP24 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.15
Nlrc4Q3UP24 AC096628.2-201ENSMUST00000225443 1413 ntBASIC14.08□□□□□ -0.15
Nlrc4Q3UP24 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Nlrc4Q3UP24 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nlrc4Q3UP24 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nlrc4Q3UP24 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nlrc4Q3UP24 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nlrc4Q3UP24 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nlrc4Q3UP24 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nlrc4Q3UP24 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nlrc4Q3UP24 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nlrc4Q3UP24 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nlrc4Q3UP24 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC14.08□□□□□ -0.16
Nlrc4Q3UP24 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Nlrc4Q3UP24 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC14.08□□□□□ -0.16
Nlrc4Q3UP24 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC14.08□□□□□ -0.16
Nlrc4Q3UP24 Gm38671-201ENSMUST00000200573 130 ntBASIC14.08□□□□□ -0.16
Nlrc4Q3UP24 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nlrc4Q3UP24 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nlrc4Q3UP24 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Nlrc4Q3UP24 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nlrc4Q3UP24 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Nlrc4Q3UP24 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nlrc4Q3UP24 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nlrc4Q3UP24 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.08□□□□□ -0.16
Nlrc4Q3UP24 Gm18630-201ENSMUST00000222109 1397 ntBASIC14.08□□□□□ -0.16
Nlrc4Q3UP24 Acot6-202ENSMUST00000222921 3622 ntBASIC14.08□□□□□ -0.16
Nlrc4Q3UP24 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nlrc4Q3UP24 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nlrc4Q3UP24 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Nlrc4Q3UP24 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nlrc4Q3UP24 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nlrc4Q3UP24 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.07□□□□□ -0.16
Nlrc4Q3UP24 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nlrc4Q3UP24 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nlrc4Q3UP24 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nlrc4Q3UP24 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC14.07□□□□□ -0.16
Nlrc4Q3UP24 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nlrc4Q3UP24 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nlrc4Q3UP24 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC14.07□□□□□ -0.16
Nlrc4Q3UP24 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nlrc4Q3UP24 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nlrc4Q3UP24 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.07□□□□□ -0.16
Nlrc4Q3UP24 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nlrc4Q3UP24 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.07□□□□□ -0.16
Nlrc4Q3UP24 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.07□□□□□ -0.16
Nlrc4Q3UP24 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nlrc4Q3UP24 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nlrc4Q3UP24 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nlrc4Q3UP24 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nlrc4Q3UP24 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nlrc4Q3UP24 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nlrc4Q3UP24 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nlrc4Q3UP24 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nlrc4Q3UP24 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.07□□□□□ -0.16
Nlrc4Q3UP24 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.07□□□□□ -0.16
Nlrc4Q3UP24 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nlrc4Q3UP24 Gm8652-201ENSMUST00000181363 964 ntBASIC14.07□□□□□ -0.16
Nlrc4Q3UP24 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC14.07□□□□□ -0.16
Nlrc4Q3UP24 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nlrc4Q3UP24 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Nlrc4Q3UP24 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nlrc4Q3UP24 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nlrc4Q3UP24 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nlrc4Q3UP24 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nlrc4Q3UP24 Abhd6-203ENSMUST00000225234 1958 ntBASIC14.07□□□□□ -0.16
Nlrc4Q3UP24 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nlrc4Q3UP24 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nlrc4Q3UP24 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nlrc4Q3UP24 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.07□□□□□ -0.16
Nlrc4Q3UP24 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.07□□□□□ -0.16
Nlrc4Q3UP24 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Nlrc4Q3UP24 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC14.07□□□□□ -0.16
Nlrc4Q3UP24 Gm9816-201ENSMUST00000122292 1414 ntBASIC14.07□□□□□ -0.16
Nlrc4Q3UP24 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nlrc4Q3UP24 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Nlrc4Q3UP24 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Nlrc4Q3UP24 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nlrc4Q3UP24 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Nlrc4Q3UP24 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nlrc4Q3UP24 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.06□□□□□ -0.16
Nlrc4Q3UP24 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nlrc4Q3UP24 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nlrc4Q3UP24 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Nlrc4Q3UP24 Gm14350-201ENSMUST00000116642 640 ntBASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms