Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Cks1brtQ3UNC9 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cks1brtQ3UNC9 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Cks1brtQ3UNC9 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cks1brtQ3UNC9 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cks1brtQ3UNC9 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC9.58□□□□□ -0.88
Cks1brtQ3UNC9 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cks1brtQ3UNC9 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC9.58□□□□□ -0.88
Cks1brtQ3UNC9 Gm45747-201ENSMUST00000212203 999 ntBASIC9.58□□□□□ -0.88
Cks1brtQ3UNC9 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC9.58□□□□□ -0.88
Cks1brtQ3UNC9 Gm18032-201ENSMUST00000222541 538 ntBASIC9.58□□□□□ -0.88
Cks1brtQ3UNC9 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC9.58□□□□□ -0.88
Cks1brtQ3UNC9 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cks1brtQ3UNC9 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cks1brtQ3UNC9 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Cks1brtQ3UNC9 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Cks1brtQ3UNC9 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cks1brtQ3UNC9 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cks1brtQ3UNC9 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cks1brtQ3UNC9 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cks1brtQ3UNC9 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cks1brtQ3UNC9 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Cks1brtQ3UNC9 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cks1brtQ3UNC9 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cks1brtQ3UNC9 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cks1brtQ3UNC9 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cks1brtQ3UNC9 Gm38273-201ENSMUST00000194987 2382 ntBASIC9.58□□□□□ -0.88
Cks1brtQ3UNC9 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Cks1brtQ3UNC9 Syt7-205ENSMUST00000224135 1557 ntBASIC9.58□□□□□ -0.88
Cks1brtQ3UNC9 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cks1brtQ3UNC9 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Cks1brtQ3UNC9 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cks1brtQ3UNC9 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cks1brtQ3UNC9 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cks1brtQ3UNC9 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cks1brtQ3UNC9 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cks1brtQ3UNC9 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Cks1brtQ3UNC9 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Cks1brtQ3UNC9 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cks1brtQ3UNC9 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Cks1brtQ3UNC9 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Cks1brtQ3UNC9 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cks1brtQ3UNC9 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cks1brtQ3UNC9 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cks1brtQ3UNC9 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Cks1brtQ3UNC9 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Cks1brtQ3UNC9 Gm38385-201ENSMUST00000194454 2351 ntBASIC9.57□□□□□ -0.88
Cks1brtQ3UNC9 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cks1brtQ3UNC9 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cks1brtQ3UNC9 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Cks1brtQ3UNC9 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Cks1brtQ3UNC9 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cks1brtQ3UNC9 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC9.57□□□□□ -0.88
Cks1brtQ3UNC9 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC9.57□□□□□ -0.88
Cks1brtQ3UNC9 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cks1brtQ3UNC9 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC9.57□□□□□ -0.88
Cks1brtQ3UNC9 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC9.57□□□□□ -0.88
Cks1brtQ3UNC9 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Cks1brtQ3UNC9 AL672049.1-201ENSMUST00000197943 91 ntBASIC9.57□□□□□ -0.88
Cks1brtQ3UNC9 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Cks1brtQ3UNC9 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cks1brtQ3UNC9 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cks1brtQ3UNC9 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cks1brtQ3UNC9 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Cks1brtQ3UNC9 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Cks1brtQ3UNC9 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC9.57□□□□□ -0.88
Cks1brtQ3UNC9 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Cks1brtQ3UNC9 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cks1brtQ3UNC9 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cks1brtQ3UNC9 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cks1brtQ3UNC9 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Cks1brtQ3UNC9 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cks1brtQ3UNC9 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cks1brtQ3UNC9 AC137842.1-201ENSMUST00000227896 2064 ntBASIC9.57□□□□□ -0.88
Cks1brtQ3UNC9 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cks1brtQ3UNC9 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cks1brtQ3UNC9 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC9.57□□□□□ -0.88
Cks1brtQ3UNC9 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cks1brtQ3UNC9 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Cks1brtQ3UNC9 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 Gm45643-201ENSMUST00000211364 1484 ntBASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC9.56□□□□□ -0.88
Cks1brtQ3UNC9 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms