Protein–RNA interactions for Protein: Q3TIR1

Trappc13, Trafficking protein particle complex subunit 13, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc13Q3TIR1 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trappc13Q3TIR1 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trappc13Q3TIR1 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trappc13Q3TIR1 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trappc13Q3TIR1 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trappc13Q3TIR1 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trappc13Q3TIR1 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trappc13Q3TIR1 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trappc13Q3TIR1 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trappc13Q3TIR1 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trappc13Q3TIR1 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trappc13Q3TIR1 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trappc13Q3TIR1 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trappc13Q3TIR1 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.48□□□□□ -0.41
Trappc13Q3TIR1 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trappc13Q3TIR1 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trappc13Q3TIR1 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trappc13Q3TIR1 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Trappc13Q3TIR1 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.48□□□□□ -0.41
Trappc13Q3TIR1 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trappc13Q3TIR1 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trappc13Q3TIR1 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.48□□□□□ -0.41
Trappc13Q3TIR1 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trappc13Q3TIR1 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.48□□□□□ -0.41
Trappc13Q3TIR1 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.48□□□□□ -0.41
Trappc13Q3TIR1 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trappc13Q3TIR1 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trappc13Q3TIR1 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.48□□□□□ -0.41
Trappc13Q3TIR1 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trappc13Q3TIR1 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trappc13Q3TIR1 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trappc13Q3TIR1 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trappc13Q3TIR1 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trappc13Q3TIR1 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trappc13Q3TIR1 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.48□□□□□ -0.41
Trappc13Q3TIR1 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trappc13Q3TIR1 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Trappc13Q3TIR1 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trappc13Q3TIR1 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trappc13Q3TIR1 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trappc13Q3TIR1 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trappc13Q3TIR1 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.48□□□□□ -0.41
Trappc13Q3TIR1 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.48□□□□□ -0.41
Trappc13Q3TIR1 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trappc13Q3TIR1 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trappc13Q3TIR1 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trappc13Q3TIR1 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trappc13Q3TIR1 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Trappc13Q3TIR1 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.47□□□□□ -0.41
Trappc13Q3TIR1 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.47□□□□□ -0.41
Trappc13Q3TIR1 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trappc13Q3TIR1 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trappc13Q3TIR1 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trappc13Q3TIR1 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trappc13Q3TIR1 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trappc13Q3TIR1 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trappc13Q3TIR1 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.47□□□□□ -0.41
Trappc13Q3TIR1 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trappc13Q3TIR1 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Trappc13Q3TIR1 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trappc13Q3TIR1 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trappc13Q3TIR1 Gm9522-201ENSMUST00000182394 926 ntBASIC12.47□□□□□ -0.41
Trappc13Q3TIR1 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trappc13Q3TIR1 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trappc13Q3TIR1 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trappc13Q3TIR1 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trappc13Q3TIR1 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trappc13Q3TIR1 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trappc13Q3TIR1 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trappc13Q3TIR1 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.47□□□□□ -0.41
Trappc13Q3TIR1 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trappc13Q3TIR1 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.47□□□□□ -0.41
Trappc13Q3TIR1 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trappc13Q3TIR1 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trappc13Q3TIR1 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trappc13Q3TIR1 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.41
Trappc13Q3TIR1 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trappc13Q3TIR1 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trappc13Q3TIR1 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trappc13Q3TIR1 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.46□□□□□ -0.41
Trappc13Q3TIR1 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trappc13Q3TIR1 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trappc13Q3TIR1 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trappc13Q3TIR1 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trappc13Q3TIR1 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trappc13Q3TIR1 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.46□□□□□ -0.41
Trappc13Q3TIR1 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trappc13Q3TIR1 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.46□□□□□ -0.41
Trappc13Q3TIR1 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.46□□□□□ -0.41
Trappc13Q3TIR1 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trappc13Q3TIR1 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.46□□□□□ -0.41
Trappc13Q3TIR1 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trappc13Q3TIR1 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trappc13Q3TIR1 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trappc13Q3TIR1 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trappc13Q3TIR1 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trappc13Q3TIR1 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trappc13Q3TIR1 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trappc13Q3TIR1 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trappc13Q3TIR1 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms