Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Q3KNL4 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.16□□□□□ -0.3
Q3KNL4 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.16□□□□□ -0.3
Q3KNL4 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Q3KNL4 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Q3KNL4 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Q3KNL4 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Q3KNL4 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Q3KNL4 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Q3KNL4 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.16□□□□□ -0.3
Q3KNL4 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Q3KNL4 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Q3KNL4 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
Q3KNL4 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Q3KNL4 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Q3KNL4 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Q3KNL4 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Q3KNL4 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Q3KNL4 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Q3KNL4 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.16□□□□□ -0.3
Q3KNL4 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Q3KNL4 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Q3KNL4 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Q3KNL4 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.15□□□□□ -0.3
Q3KNL4 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Q3KNL4 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Q3KNL4 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.15□□□□□ -0.3
Q3KNL4 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.15□□□□□ -0.3
Q3KNL4 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Q3KNL4 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Q3KNL4 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Q3KNL4 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.15□□□□□ -0.3
Q3KNL4 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Q3KNL4 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Q3KNL4 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Q3KNL4 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Q3KNL4 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Q3KNL4 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Q3KNL4 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Q3KNL4 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Q3KNL4 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Q3KNL4 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Q3KNL4 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.15□□□□□ -0.3
Q3KNL4 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Q3KNL4 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Q3KNL4 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Q3KNL4 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Q3KNL4 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.15□□□□□ -0.3
Q3KNL4 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Q3KNL4 Gm43703-201ENSMUST00000200523 763 ntBASIC13.15□□□□□ -0.3
Q3KNL4 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Q3KNL4 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Q3KNL4 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Q3KNL4 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Q3KNL4 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Q3KNL4 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Q3KNL4 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Q3KNL4 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Q3KNL4 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Q3KNL4 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Q3KNL4 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
Q3KNL4 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Q3KNL4 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Q3KNL4 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.15□□□□□ -0.31
Q3KNL4 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Q3KNL4 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Q3KNL4 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
Q3KNL4 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Q3KNL4 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Q3KNL4 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Q3KNL4 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Q3KNL4 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Q3KNL4 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Q3KNL4 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Q3KNL4 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Q3KNL4 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Q3KNL4 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC13.14□□□□□ -0.31
Q3KNL4 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Q3KNL4 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Q3KNL4 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Q3KNL4 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Q3KNL4 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.14□□□□□ -0.31
Q3KNL4 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.14□□□□□ -0.31
Q3KNL4 Gm27680-201ENSMUST00000184192 160 ntBASIC13.14□□□□□ -0.31
Q3KNL4 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Q3KNL4 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.14□□□□□ -0.31
Q3KNL4 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.14□□□□□ -0.31
Q3KNL4 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.14□□□□□ -0.31
Q3KNL4 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Q3KNL4 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Q3KNL4 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Q3KNL4 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.14□□□□□ -0.31
Q3KNL4 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Q3KNL4 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.14□□□□□ -0.31
Q3KNL4 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.14□□□□□ -0.31
Q3KNL4 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Q3KNL4 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Q3KNL4 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Q3KNL4 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13.14□□□□□ -0.31
Q3KNL4 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms