Protein–RNA interactions for Protein: Q07409

Cntn3, Contactin-3, mousemouse

Predictions only

Length 1,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn3Q07409 Gm6091-201ENSMUST00000098307 165 ntBASIC14.02□□□□□ -0.17
Cntn3Q07409 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cntn3Q07409 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cntn3Q07409 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cntn3Q07409 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Cntn3Q07409 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cntn3Q07409 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Cntn3Q07409 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Cntn3Q07409 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cntn3Q07409 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cntn3Q07409 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cntn3Q07409 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cntn3Q07409 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cntn3Q07409 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cntn3Q07409 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cntn3Q07409 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.01□□□□□ -0.17
Cntn3Q07409 Zscan30-202ENSMUST00000224144 1458 ntBASIC14.01□□□□□ -0.17
Cntn3Q07409 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cntn3Q07409 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cntn3Q07409 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cntn3Q07409 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Cntn3Q07409 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cntn3Q07409 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cntn3Q07409 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cntn3Q07409 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14.01□□□□□ -0.17
Cntn3Q07409 Mir1982-201ENSMUST00000157368 74 ntBASIC14.01□□□□□ -0.17
Cntn3Q07409 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cntn3Q07409 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cntn3Q07409 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cntn3Q07409 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC14.01□□□□□ -0.17
Cntn3Q07409 AY702102-202ENSMUST00000194651 1173 ntBASIC14.01□□□□□ -0.17
Cntn3Q07409 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC14.01□□□□□ -0.17
Cntn3Q07409 Itm2b-204ENSMUST00000228637 783 ntBASIC14.01□□□□□ -0.17
Cntn3Q07409 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cntn3Q07409 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cntn3Q07409 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cntn3Q07409 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cntn3Q07409 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Cntn3Q07409 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cntn3Q07409 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cntn3Q07409 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cntn3Q07409 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cntn3Q07409 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cntn3Q07409 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.01□□□□□ -0.17
Cntn3Q07409 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cntn3Q07409 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Cntn3Q07409 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cntn3Q07409 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cntn3Q07409 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cntn3Q07409 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cntn3Q07409 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cntn3Q07409 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Cntn3Q07409 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cntn3Q07409 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cntn3Q07409 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cntn3Q07409 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cntn3Q07409 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Cntn3Q07409 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cntn3Q07409 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Cntn3Q07409 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cntn3Q07409 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cntn3Q07409 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14□□□□□ -0.17
Cntn3Q07409 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cntn3Q07409 Gm9755-201ENSMUST00000032981 1356 ntBASIC14□□□□□ -0.17
Cntn3Q07409 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cntn3Q07409 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Cntn3Q07409 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cntn3Q07409 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cntn3Q07409 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC14□□□□□ -0.17
Cntn3Q07409 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Cntn3Q07409 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC14□□□□□ -0.17
Cntn3Q07409 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Cntn3Q07409 Gm29649-201ENSMUST00000185649 419 ntBASIC14□□□□□ -0.17
Cntn3Q07409 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cntn3Q07409 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC14□□□□□ -0.17
Cntn3Q07409 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
Cntn3Q07409 Gm8598-201ENSMUST00000221184 836 ntBASIC14□□□□□ -0.17
Cntn3Q07409 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cntn3Q07409 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cntn3Q07409 Rn7sk-201ENSMUST00000083103 331 ntBASIC14□□□□□ -0.17
Cntn3Q07409 Gm26315-201ENSMUST00000083890 321 ntBASIC14□□□□□ -0.17
Cntn3Q07409 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cntn3Q07409 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14□□□□□ -0.17
Cntn3Q07409 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cntn3Q07409 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cntn3Q07409 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cntn3Q07409 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Cntn3Q07409 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cntn3Q07409 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Cntn3Q07409 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC14□□□□□ -0.17
Cntn3Q07409 Gm10305-201ENSMUST00000195331 2475 ntBASIC14□□□□□ -0.17
Cntn3Q07409 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Cntn3Q07409 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.99□□□□□ -0.17
Cntn3Q07409 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cntn3Q07409 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cntn3Q07409 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Cntn3Q07409 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Cntn3Q07409 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Cntn3Q07409 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Cntn3Q07409 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms