Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col10a1Q05306 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col10a1Q05306 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.35□□□□□ -0.43
Col10a1Q05306 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col10a1Q05306 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col10a1Q05306 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col10a1Q05306 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col10a1Q05306 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col10a1Q05306 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.35□□□□□ -0.43
Col10a1Q05306 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col10a1Q05306 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col10a1Q05306 Gm15429-201ENSMUST00000151268 798 ntBASIC12.35□□□□□ -0.43
Col10a1Q05306 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.35□□□□□ -0.43
Col10a1Q05306 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.35□□□□□ -0.43
Col10a1Q05306 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.35□□□□□ -0.43
Col10a1Q05306 Gm45384-201ENSMUST00000210451 277 ntBASIC12.35□□□□□ -0.43
Col10a1Q05306 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Col10a1Q05306 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.35□□□□□ -0.43
Col10a1Q05306 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col10a1Q05306 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col10a1Q05306 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col10a1Q05306 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col10a1Q05306 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Col10a1Q05306 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Col10a1Q05306 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Col10a1Q05306 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col10a1Q05306 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.35□□□□□ -0.43
Col10a1Q05306 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.35□□□□□ -0.43
Col10a1Q05306 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.35□□□□□ -0.43
Col10a1Q05306 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col10a1Q05306 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Col10a1Q05306 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col10a1Q05306 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col10a1Q05306 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Col10a1Q05306 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Col10a1Q05306 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col10a1Q05306 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.34□□□□□ -0.43
Col10a1Q05306 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col10a1Q05306 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.34□□□□□ -0.43
Col10a1Q05306 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Col10a1Q05306 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col10a1Q05306 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col10a1Q05306 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col10a1Q05306 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col10a1Q05306 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col10a1Q05306 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Col10a1Q05306 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Col10a1Q05306 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col10a1Q05306 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col10a1Q05306 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col10a1Q05306 Gm15371-201ENSMUST00000117057 784 ntBASIC12.34□□□□□ -0.43
Col10a1Q05306 Gm11918-201ENSMUST00000121660 179 ntBASIC12.34□□□□□ -0.43
Col10a1Q05306 Gm12138-201ENSMUST00000122180 951 ntBASIC12.34□□□□□ -0.43
Col10a1Q05306 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.34□□□□□ -0.43
Col10a1Q05306 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col10a1Q05306 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.34□□□□□ -0.43
Col10a1Q05306 Gm27701-201ENSMUST00000184498 110 ntBASIC12.34□□□□□ -0.43
Col10a1Q05306 Gm28911-201ENSMUST00000188837 117 ntBASIC12.34□□□□□ -0.43
Col10a1Q05306 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col10a1Q05306 Gm9794-201ENSMUST00000202370 423 ntBASIC12.34□□□□□ -0.43
Col10a1Q05306 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.34□□□□□ -0.43
Col10a1Q05306 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Col10a1Q05306 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Col10a1Q05306 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col10a1Q05306 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col10a1Q05306 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col10a1Q05306 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col10a1Q05306 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Col10a1Q05306 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Col10a1Q05306 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col10a1Q05306 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.34□□□□□ -0.43
Col10a1Q05306 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col10a1Q05306 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col10a1Q05306 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Col10a1Q05306 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.34□□□□□ -0.43
Col10a1Q05306 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Col10a1Q05306 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Col10a1Q05306 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.34□□□□□ -0.43
Col10a1Q05306 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Col10a1Q05306 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Col10a1Q05306 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.33□□□□□ -0.43
Col10a1Q05306 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col10a1Q05306 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col10a1Q05306 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col10a1Q05306 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Col10a1Q05306 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col10a1Q05306 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col10a1Q05306 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col10a1Q05306 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col10a1Q05306 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.33□□□□□ -0.44
Col10a1Q05306 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Col10a1Q05306 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col10a1Q05306 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col10a1Q05306 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col10a1Q05306 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Col10a1Q05306 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Col10a1Q05306 Gm12490-201ENSMUST00000120255 560 ntBASIC12.33□□□□□ -0.44
Col10a1Q05306 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.33□□□□□ -0.44
Col10a1Q05306 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Col10a1Q05306 Gm6983-201ENSMUST00000214912 628 ntBASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms