Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Thumpd3P97770 Gm15653-201ENSMUST00000119247 907 ntBASIC13.64□□□□□ -0.23
Thumpd3P97770 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Thumpd3P97770 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Thumpd3P97770 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.64□□□□□ -0.23
Thumpd3P97770 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Thumpd3P97770 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.64□□□□□ -0.23
Thumpd3P97770 Gm16476-201ENSMUST00000221544 139 ntBASIC13.64□□□□□ -0.23
Thumpd3P97770 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.64□□□□□ -0.23
Thumpd3P97770 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Thumpd3P97770 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Thumpd3P97770 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Thumpd3P97770 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Thumpd3P97770 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Thumpd3P97770 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Thumpd3P97770 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Thumpd3P97770 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Thumpd3P97770 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Thumpd3P97770 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Thumpd3P97770 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Thumpd3P97770 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Thumpd3P97770 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Thumpd3P97770 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Thumpd3P97770 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.63□□□□□ -0.23
Thumpd3P97770 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Thumpd3P97770 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Thumpd3P97770 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.63□□□□□ -0.23
Thumpd3P97770 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
Thumpd3P97770 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Thumpd3P97770 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Thumpd3P97770 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Thumpd3P97770 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Thumpd3P97770 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Thumpd3P97770 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Thumpd3P97770 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Thumpd3P97770 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Thumpd3P97770 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Thumpd3P97770 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.63□□□□□ -0.23
Thumpd3P97770 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.63□□□□□ -0.23
Thumpd3P97770 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Thumpd3P97770 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Thumpd3P97770 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Thumpd3P97770 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Thumpd3P97770 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Thumpd3P97770 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Thumpd3P97770 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Thumpd3P97770 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Thumpd3P97770 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Thumpd3P97770 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Thumpd3P97770 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.63□□□□□ -0.23
Thumpd3P97770 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.63□□□□□ -0.23
Thumpd3P97770 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Thumpd3P97770 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Thumpd3P97770 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.63□□□□□ -0.23
Thumpd3P97770 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Thumpd3P97770 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Thumpd3P97770 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Thumpd3P97770 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Thumpd3P97770 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Thumpd3P97770 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Thumpd3P97770 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Thumpd3P97770 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Thumpd3P97770 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Thumpd3P97770 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Thumpd3P97770 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.62□□□□□ -0.23
Thumpd3P97770 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.62□□□□□ -0.23
Thumpd3P97770 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Thumpd3P97770 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.62□□□□□ -0.23
Thumpd3P97770 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Thumpd3P97770 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Thumpd3P97770 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Thumpd3P97770 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.62□□□□□ -0.23
Thumpd3P97770 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.62□□□□□ -0.23
Thumpd3P97770 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.62□□□□□ -0.23
Thumpd3P97770 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Thumpd3P97770 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Thumpd3P97770 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Thumpd3P97770 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Thumpd3P97770 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Thumpd3P97770 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Thumpd3P97770 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Thumpd3P97770 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Thumpd3P97770 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Thumpd3P97770 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Thumpd3P97770 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Thumpd3P97770 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Thumpd3P97770 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.62□□□□□ -0.23
Thumpd3P97770 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Thumpd3P97770 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Thumpd3P97770 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Thumpd3P97770 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Thumpd3P97770 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.62□□□□□ -0.23
Thumpd3P97770 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thumpd3P97770 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thumpd3P97770 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Thumpd3P97770 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thumpd3P97770 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thumpd3P97770 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thumpd3P97770 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Thumpd3P97770 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms