Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim43bP86448 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim43bP86448 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim43bP86448 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43bP86448 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43bP86448 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43bP86448 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC13.78□□□□□ -0.2
Trim43bP86448 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43bP86448 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43bP86448 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43bP86448 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43bP86448 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43bP86448 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43bP86448 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43bP86448 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43bP86448 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43bP86448 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43bP86448 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.78□□□□□ -0.2
Trim43bP86448 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.78□□□□□ -0.2
Trim43bP86448 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trim43bP86448 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.78□□□□□ -0.2
Trim43bP86448 Gm43703-201ENSMUST00000200523 763 ntBASIC13.78□□□□□ -0.2
Trim43bP86448 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43bP86448 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43bP86448 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Trim43bP86448 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43bP86448 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Trim43bP86448 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trim43bP86448 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43bP86448 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43bP86448 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43bP86448 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.78□□□□□ -0.2
Trim43bP86448 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43bP86448 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43bP86448 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43bP86448 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43bP86448 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43bP86448 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trim43bP86448 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43bP86448 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43bP86448 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43bP86448 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43bP86448 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43bP86448 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43bP86448 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43bP86448 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim43bP86448 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.78□□□□□ -0.2
Trim43bP86448 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trim43bP86448 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trim43bP86448 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trim43bP86448 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Trim43bP86448 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trim43bP86448 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trim43bP86448 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43bP86448 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.77□□□□□ -0.21
Trim43bP86448 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.77□□□□□ -0.21
Trim43bP86448 Gm33320-201ENSMUST00000192232 530 ntBASIC13.77□□□□□ -0.21
Trim43bP86448 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43bP86448 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.77□□□□□ -0.21
Trim43bP86448 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.77□□□□□ -0.21
Trim43bP86448 Gm5425-201ENSMUST00000214125 459 ntBASIC13.77□□□□□ -0.21
Trim43bP86448 Gm4780-202ENSMUST00000215200 2644 ntBASIC13.77□□□□□ -0.21
Trim43bP86448 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43bP86448 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43bP86448 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43bP86448 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43bP86448 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Trim43bP86448 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43bP86448 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43bP86448 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43bP86448 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43bP86448 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43bP86448 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Trim43bP86448 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43bP86448 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.77□□□□□ -0.21
Trim43bP86448 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43bP86448 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Trim43bP86448 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim43bP86448 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.76□□□□□ -0.21
Trim43bP86448 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43bP86448 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43bP86448 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43bP86448 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.76□□□□□ -0.21
Trim43bP86448 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43bP86448 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.76□□□□□ -0.21
Trim43bP86448 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43bP86448 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43bP86448 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.76□□□□□ -0.21
Trim43bP86448 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43bP86448 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trim43bP86448 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43bP86448 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43bP86448 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43bP86448 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43bP86448 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43bP86448 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43bP86448 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim43bP86448 Gm4875-201ENSMUST00000118257 786 ntBASIC13.76□□□□□ -0.21
Trim43bP86448 Gm16215-201ENSMUST00000161990 637 ntBASIC13.76□□□□□ -0.21
Trim43bP86448 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms