Protein–RNA interactions for Protein: P70658

Cxcr4, C-X-C chemokine receptor type 4, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr4P70658 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cxcr4P70658 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cxcr4P70658 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Cxcr4P70658 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cxcr4P70658 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Cxcr4P70658 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cxcr4P70658 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Cxcr4P70658 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.58□□□□□ -0.4
Cxcr4P70658 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.58□□□□□ -0.4
Cxcr4P70658 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.57□□□□□ -0.4
Cxcr4P70658 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcr4P70658 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcr4P70658 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcr4P70658 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcr4P70658 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.57□□□□□ -0.4
Cxcr4P70658 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Cxcr4P70658 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcr4P70658 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.57□□□□□ -0.4
Cxcr4P70658 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcr4P70658 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcr4P70658 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcr4P70658 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcr4P70658 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcr4P70658 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcr4P70658 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcr4P70658 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcr4P70658 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.57□□□□□ -0.4
Cxcr4P70658 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Cxcr4P70658 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.57□□□□□ -0.4
Cxcr4P70658 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcr4P70658 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcr4P70658 Gm6218-201ENSMUST00000219812 628 ntBASIC12.57□□□□□ -0.4
Cxcr4P70658 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.57□□□□□ -0.4
Cxcr4P70658 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcr4P70658 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcr4P70658 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcr4P70658 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcr4P70658 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Cxcr4P70658 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcr4P70658 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Cxcr4P70658 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcr4P70658 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcr4P70658 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcr4P70658 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.57□□□□□ -0.4
Cxcr4P70658 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcr4P70658 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcr4P70658 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Cxcr4P70658 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcr4P70658 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcr4P70658 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcr4P70658 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Cxcr4P70658 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcr4P70658 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcr4P70658 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Cxcr4P70658 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcr4P70658 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcr4P70658 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcr4P70658 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcr4P70658 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcr4P70658 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcr4P70658 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcr4P70658 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcr4P70658 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcr4P70658 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcr4P70658 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcr4P70658 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcr4P70658 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcr4P70658 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.56□□□□□ -0.4
Cxcr4P70658 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.56□□□□□ -0.4
Cxcr4P70658 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcr4P70658 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Cxcr4P70658 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.56□□□□□ -0.4
Cxcr4P70658 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Cxcr4P70658 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.56□□□□□ -0.4
Cxcr4P70658 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.56□□□□□ -0.4
Cxcr4P70658 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcr4P70658 Gm9797-201ENSMUST00000052902 613 ntBASIC12.56□□□□□ -0.4
Cxcr4P70658 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcr4P70658 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcr4P70658 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcr4P70658 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcr4P70658 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcr4P70658 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcr4P70658 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcr4P70658 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcr4P70658 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcr4P70658 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Cxcr4P70658 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.56□□□□□ -0.4
Cxcr4P70658 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcr4P70658 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Cxcr4P70658 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcr4P70658 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcr4P70658 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcr4P70658 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcr4P70658 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcr4P70658 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.55□□□□□ -0.4
Cxcr4P70658 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Cxcr4P70658 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Cxcr4P70658 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Cxcr4P70658 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms