Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgb1P63158 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgb1P63158 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.76□□□□□ -0.05
Hmgb1P63158 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgb1P63158 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgb1P63158 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Hmgb1P63158 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgb1P63158 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgb1P63158 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgb1P63158 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgb1P63158 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgb1P63158 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Hmgb1P63158 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgb1P63158 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgb1P63158 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgb1P63158 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgb1P63158 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Hmgb1P63158 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgb1P63158 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Hmgb1P63158 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgb1P63158 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgb1P63158 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgb1P63158 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgb1P63158 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgb1P63158 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgb1P63158 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.75□□□□□ -0.05
Hmgb1P63158 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.75□□□□□ -0.05
Hmgb1P63158 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.75□□□□□ -0.05
Hmgb1P63158 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.75□□□□□ -0.05
Hmgb1P63158 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgb1P63158 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgb1P63158 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC14.75□□□□□ -0.05
Hmgb1P63158 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.75□□□□□ -0.05
Hmgb1P63158 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgb1P63158 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Hmgb1P63158 Syt7-205ENSMUST00000224135 1557 ntBASIC14.75□□□□□ -0.05
Hmgb1P63158 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgb1P63158 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgb1P63158 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.75□□□□□ -0.05
Hmgb1P63158 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgb1P63158 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Hmgb1P63158 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgb1P63158 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgb1P63158 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgb1P63158 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgb1P63158 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Hmgb1P63158 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hmgb1P63158 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hmgb1P63158 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.74□□□□□ -0.05
Hmgb1P63158 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hmgb1P63158 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hmgb1P63158 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.74□□□□□ -0.05
Hmgb1P63158 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Hmgb1P63158 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hmgb1P63158 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hmgb1P63158 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Hmgb1P63158 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hmgb1P63158 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hmgb1P63158 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.74□□□□□ -0.05
Hmgb1P63158 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.74□□□□□ -0.05
Hmgb1P63158 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.74□□□□□ -0.05
Hmgb1P63158 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.74□□□□□ -0.05
Hmgb1P63158 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.74□□□□□ -0.05
Hmgb1P63158 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Hmgb1P63158 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC14.74□□□□□ -0.05
Hmgb1P63158 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.74□□□□□ -0.05
Hmgb1P63158 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.74□□□□□ -0.05
Hmgb1P63158 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hmgb1P63158 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.74□□□□□ -0.05
Hmgb1P63158 Gm24447-201ENSMUST00000083977 338 ntBASIC14.74□□□□□ -0.05
Hmgb1P63158 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hmgb1P63158 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Hmgb1P63158 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hmgb1P63158 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC14.74□□□□□ -0.05
Hmgb1P63158 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Hmgb1P63158 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hmgb1P63158 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hmgb1P63158 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hmgb1P63158 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hmgb1P63158 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Hmgb1P63158 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Hmgb1P63158 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Hmgb1P63158 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hmgb1P63158 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Hmgb1P63158 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.74□□□□□ -0.05
Hmgb1P63158 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hmgb1P63158 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.73□□□□□ -0.05
Hmgb1P63158 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hmgb1P63158 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Hmgb1P63158 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hmgb1P63158 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Hmgb1P63158 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Hmgb1P63158 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.73□□□□□ -0.05
Hmgb1P63158 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hmgb1P63158 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Hmgb1P63158 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Hmgb1P63158 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Hmgb1P63158 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Hmgb1P63158 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.73□□□□□ -0.05
Hmgb1P63158 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms