Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm6P62313 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm6P62313 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm6P62313 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm6P62313 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Lsm6P62313 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Lsm6P62313 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Lsm6P62313 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Lsm6P62313 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lsm6P62313 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lsm6P62313 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lsm6P62313 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11.75□□□□□ -0.53
Lsm6P62313 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lsm6P62313 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lsm6P62313 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lsm6P62313 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lsm6P62313 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Lsm6P62313 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lsm6P62313 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.75□□□□□ -0.53
Lsm6P62313 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.75□□□□□ -0.53
Lsm6P62313 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lsm6P62313 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Lsm6P62313 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Lsm6P62313 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Lsm6P62313 Mir7221-201ENSMUST00000184009 72 ntBASIC11.75□□□□□ -0.53
Lsm6P62313 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Lsm6P62313 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC11.75□□□□□ -0.53
Lsm6P62313 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC11.75□□□□□ -0.53
Lsm6P62313 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC11.75□□□□□ -0.53
Lsm6P62313 Gm45841-201ENSMUST00000207700 164 ntBASIC11.75□□□□□ -0.53
Lsm6P62313 Gm7730-201ENSMUST00000212486 454 ntBASIC11.75□□□□□ -0.53
Lsm6P62313 AC192088.1-201ENSMUST00000227561 301 ntBASIC11.75□□□□□ -0.53
Lsm6P62313 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lsm6P62313 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lsm6P62313 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lsm6P62313 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Lsm6P62313 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lsm6P62313 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lsm6P62313 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.75□□□□□ -0.53
Lsm6P62313 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lsm6P62313 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Lsm6P62313 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lsm6P62313 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Lsm6P62313 Gm44065-201ENSMUST00000203184 3527 ntBASIC11.75□□□□□ -0.53
Lsm6P62313 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lsm6P62313 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lsm6P62313 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.75□□□□□ -0.53
Lsm6P62313 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.75□□□□□ -0.53
Lsm6P62313 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lsm6P62313 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lsm6P62313 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lsm6P62313 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lsm6P62313 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lsm6P62313 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lsm6P62313 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lsm6P62313 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lsm6P62313 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lsm6P62313 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lsm6P62313 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Lsm6P62313 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm6P62313 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm6P62313 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm6P62313 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Lsm6P62313 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm6P62313 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm6P62313 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm6P62313 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm6P62313 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm6P62313 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm6P62313 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm6P62313 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC11.74□□□□□ -0.53
Lsm6P62313 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm6P62313 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm6P62313 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm6P62313 Ldha-ps-201ENSMUST00000119390 995 ntBASIC11.74□□□□□ -0.53
Lsm6P62313 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC11.74□□□□□ -0.53
Lsm6P62313 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC11.74□□□□□ -0.53
Lsm6P62313 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11.74□□□□□ -0.53
Lsm6P62313 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC11.74□□□□□ -0.53
Lsm6P62313 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Lsm6P62313 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm6P62313 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Lsm6P62313 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm6P62313 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm6P62313 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm6P62313 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm6P62313 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm6P62313 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm6P62313 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm6P62313 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.74□□□□□ -0.53
Lsm6P62313 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm6P62313 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.74□□□□□ -0.53
Lsm6P62313 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm6P62313 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Lsm6P62313 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.74□□□□□ -0.53
Lsm6P62313 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Lsm6P62313 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm6P62313 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.73□□□□□ -0.53
Lsm6P62313 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Lsm6P62313 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms