Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nup43P59235 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.64□□□□□ -0.39
Nup43P59235 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup43P59235 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nup43P59235 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.64□□□□□ -0.39
Nup43P59235 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.64□□□□□ -0.39
Nup43P59235 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.64□□□□□ -0.39
Nup43P59235 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.64□□□□□ -0.39
Nup43P59235 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.64□□□□□ -0.39
Nup43P59235 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup43P59235 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup43P59235 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nup43P59235 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Nup43P59235 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup43P59235 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup43P59235 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup43P59235 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.64□□□□□ -0.39
Nup43P59235 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup43P59235 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.64□□□□□ -0.39
Nup43P59235 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup43P59235 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Nup43P59235 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup43P59235 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup43P59235 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup43P59235 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup43P59235 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nup43P59235 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.63□□□□□ -0.39
Nup43P59235 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Nup43P59235 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Nup43P59235 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup43P59235 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup43P59235 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup43P59235 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup43P59235 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nup43P59235 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup43P59235 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.63□□□□□ -0.39
Nup43P59235 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.63□□□□□ -0.39
Nup43P59235 Gm12928-201ENSMUST00000117115 573 ntBASIC12.63□□□□□ -0.39
Nup43P59235 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.63□□□□□ -0.39
Nup43P59235 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nup43P59235 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nup43P59235 Gm2495-201ENSMUST00000191160 466 ntBASIC12.63□□□□□ -0.39
Nup43P59235 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.63□□□□□ -0.39
Nup43P59235 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.63□□□□□ -0.39
Nup43P59235 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.63□□□□□ -0.39
Nup43P59235 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup43P59235 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.63□□□□□ -0.39
Nup43P59235 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nup43P59235 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup43P59235 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup43P59235 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.63□□□□□ -0.39
Nup43P59235 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nup43P59235 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Nup43P59235 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Nup43P59235 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nup43P59235 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nup43P59235 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.62□□□□□ -0.39
Nup43P59235 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup43P59235 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Nup43P59235 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nup43P59235 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Nup43P59235 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup43P59235 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup43P59235 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nup43P59235 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup43P59235 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nup43P59235 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Nup43P59235 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup43P59235 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nup43P59235 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Nup43P59235 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup43P59235 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Nup43P59235 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup43P59235 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nup43P59235 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Nup43P59235 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup43P59235 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.62□□□□□ -0.39
Nup43P59235 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nup43P59235 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nup43P59235 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Nup43P59235 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Nup43P59235 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nup43P59235 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.62□□□□□ -0.39
Nup43P59235 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.62□□□□□ -0.39
Nup43P59235 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.62□□□□□ -0.39
Nup43P59235 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup43P59235 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup43P59235 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup43P59235 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nup43P59235 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup43P59235 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup43P59235 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup43P59235 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup43P59235 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup43P59235 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup43P59235 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup43P59235 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup43P59235 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nup43P59235 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Nup43P59235 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms