Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC11.09□□□□□ -0.63
Nkx2-1P50220 AC158529.1-201ENSMUST00000223618 239 ntBASIC11.09□□□□□ -0.63
Nkx2-1P50220 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-1P50220 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-1P50220 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Nkx2-1P50220 Gm15500-202ENSMUST00000071641 1019 ntBASIC11.09□□□□□ -0.63
Nkx2-1P50220 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Nkx2-1P50220 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-1P50220 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.09□□□□□ -0.63
Nkx2-1P50220 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-1P50220 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.09□□□□□ -0.63
Nkx2-1P50220 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-1P50220 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-1P50220 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-1P50220 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-1P50220 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
Nkx2-1P50220 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-1P50220 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-1P50220 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-1P50220 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-1P50220 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.09□□□□□ -0.63
Nkx2-1P50220 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC11.09□□□□□ -0.63
Nkx2-1P50220 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-1P50220 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-1P50220 Gm14452-201ENSMUST00000118680 1632 ntBASIC11.09□□□□□ -0.63
Nkx2-1P50220 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-1P50220 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-1P50220 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-1P50220 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-1P50220 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-1P50220 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC11.09□□□□□ -0.63
Nkx2-1P50220 Gm42466-201ENSMUST00000202099 1301 ntBASIC11.09□□□□□ -0.63
Nkx2-1P50220 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Nkx2-1P50220 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
Nkx2-1P50220 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.63
Nkx2-1P50220 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.63
Nkx2-1P50220 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-1P50220 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-1P50220 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-1P50220 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-1P50220 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-1P50220 Rubie-203ENSMUST00000227803 2430 ntBASIC11.08□□□□□ -0.64
Nkx2-1P50220 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-1P50220 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-1P50220 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-1P50220 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-1P50220 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.08□□□□□ -0.64
Nkx2-1P50220 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-1P50220 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.08□□□□□ -0.64
Nkx2-1P50220 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Nkx2-1P50220 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Nkx2-1P50220 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-1P50220 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-1P50220 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-1P50220 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC11.08□□□□□ -0.64
Nkx2-1P50220 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-1P50220 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-1P50220 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC11.08□□□□□ -0.64
Nkx2-1P50220 Gm27494-201ENSMUST00000184735 189 ntBASIC11.08□□□□□ -0.64
Nkx2-1P50220 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC11.08□□□□□ -0.64
Nkx2-1P50220 AC166997.1-201ENSMUST00000225122 572 ntBASIC11.08□□□□□ -0.64
Nkx2-1P50220 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-1P50220 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-1P50220 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-1P50220 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-1P50220 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-1P50220 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-1P50220 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.08□□□□□ -0.64
Nkx2-1P50220 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-1P50220 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-1P50220 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-1P50220 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-1P50220 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-1P50220 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-1P50220 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-1P50220 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-1P50220 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-1P50220 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Nkx2-1P50220 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-1P50220 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-1P50220 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
Nkx2-1P50220 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-1P50220 Gm2810-201ENSMUST00000118681 990 ntBASIC11.07□□□□□ -0.64
Nkx2-1P50220 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC11.07□□□□□ -0.64
Nkx2-1P50220 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-1P50220 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-1P50220 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-1P50220 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-1P50220 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-1P50220 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-1P50220 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-1P50220 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC11.07□□□□□ -0.64
Nkx2-1P50220 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-1P50220 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.07□□□□□ -0.64
Nkx2-1P50220 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-1P50220 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Nkx2-1P50220 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Nkx2-1P50220 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-1P50220 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Nkx2-1P50220 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms