Protein–RNA interactions for Protein: P48678

Lmna, Prelamin-A/C, mousemouse

Known RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LmnaP48678 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
LmnaP48678 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LmnaP48678 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LmnaP48678 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
LmnaP48678 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LmnaP48678 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LmnaP48678 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.94□□□□□ -0.18
LmnaP48678 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LmnaP48678 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LmnaP48678 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.94□□□□□ -0.18
LmnaP48678 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
LmnaP48678 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.94□□□□□ -0.18
LmnaP48678 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.94□□□□□ -0.18
LmnaP48678 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.94□□□□□ -0.18
LmnaP48678 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.94□□□□□ -0.18
LmnaP48678 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LmnaP48678 Gm43822-201ENSMUST00000200285 476 ntBASIC13.94□□□□□ -0.18
LmnaP48678 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC13.94□□□□□ -0.18
LmnaP48678 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.94□□□□□ -0.18
LmnaP48678 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LmnaP48678 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
LmnaP48678 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LmnaP48678 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LmnaP48678 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LmnaP48678 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LmnaP48678 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LmnaP48678 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
LmnaP48678 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LmnaP48678 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LmnaP48678 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
LmnaP48678 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LmnaP48678 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.94□□□□□ -0.18
LmnaP48678 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LmnaP48678 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.94□□□□□ -0.18
LmnaP48678 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LmnaP48678 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LmnaP48678 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LmnaP48678 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LmnaP48678 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
LmnaP48678 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
LmnaP48678 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LmnaP48678 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LmnaP48678 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LmnaP48678 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LmnaP48678 Gm12384-201ENSMUST00000119228 919 ntBASIC13.93□□□□□ -0.18
LmnaP48678 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LmnaP48678 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC13.93□□□□□ -0.18
LmnaP48678 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.93□□□□□ -0.18
LmnaP48678 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.93□□□□□ -0.18
LmnaP48678 Gm2495-201ENSMUST00000191160 466 ntBASIC13.93□□□□□ -0.18
LmnaP48678 Gm4857-201ENSMUST00000192718 785 ntBASIC13.93□□□□□ -0.18
LmnaP48678 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.93□□□□□ -0.18
LmnaP48678 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.93□□□□□ -0.18
LmnaP48678 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LmnaP48678 Gm17795-201ENSMUST00000214505 757 ntBASIC13.93□□□□□ -0.18
LmnaP48678 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.93□□□□□ -0.18
LmnaP48678 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LmnaP48678 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LmnaP48678 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LmnaP48678 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LmnaP48678 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LmnaP48678 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.93□□□□□ -0.18
LmnaP48678 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LmnaP48678 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
LmnaP48678 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LmnaP48678 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
LmnaP48678 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LmnaP48678 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
LmnaP48678 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LmnaP48678 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LmnaP48678 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LmnaP48678 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LmnaP48678 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
LmnaP48678 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LmnaP48678 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
LmnaP48678 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LmnaP48678 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LmnaP48678 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LmnaP48678 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
LmnaP48678 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LmnaP48678 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LmnaP48678 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
LmnaP48678 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LmnaP48678 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LmnaP48678 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC13.92□□□□□ -0.18
LmnaP48678 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.92□□□□□ -0.18
LmnaP48678 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LmnaP48678 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
LmnaP48678 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.92□□□□□ -0.18
LmnaP48678 Gm8463-201ENSMUST00000208573 613 ntBASIC13.92□□□□□ -0.18
LmnaP48678 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LmnaP48678 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.92□□□□□ -0.18
LmnaP48678 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LmnaP48678 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.92□□□□□ -0.18
LmnaP48678 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LmnaP48678 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LmnaP48678 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LmnaP48678 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LmnaP48678 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LmnaP48678 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms