Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Nkx2-6P43688 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.65□□□□□ -0.38
Nkx2-6P43688 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-6P43688 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Nkx2-6P43688 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-6P43688 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-6P43688 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-6P43688 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.65□□□□□ -0.38
Nkx2-6P43688 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-6P43688 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-6P43688 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-6P43688 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-6P43688 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-6P43688 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Nkx2-6P43688 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-6P43688 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.65□□□□□ -0.38
Nkx2-6P43688 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-6P43688 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.65□□□□□ -0.38
Nkx2-6P43688 Gm27682-201ENSMUST00000183930 110 ntBASIC12.65□□□□□ -0.38
Nkx2-6P43688 Gm37497-201ENSMUST00000195830 798 ntBASIC12.65□□□□□ -0.38
Nkx2-6P43688 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-6P43688 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-6P43688 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-6P43688 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.65□□□□□ -0.38
Nkx2-6P43688 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-6P43688 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-6P43688 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-6P43688 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.65□□□□□ -0.38
Nkx2-6P43688 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.65□□□□□ -0.38
Nkx2-6P43688 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-6P43688 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-6P43688 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Nkx2-6P43688 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Nkx2-6P43688 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Nkx2-6P43688 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Nkx2-6P43688 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-6P43688 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-6P43688 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-6P43688 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Nkx2-6P43688 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-6P43688 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-6P43688 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-6P43688 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-6P43688 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-6P43688 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-6P43688 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Nkx2-6P43688 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-6P43688 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-6P43688 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Nkx2-6P43688 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-6P43688 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-6P43688 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Nkx2-6P43688 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-6P43688 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-6P43688 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-6P43688 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.64□□□□□ -0.39
Nkx2-6P43688 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.64□□□□□ -0.39
Nkx2-6P43688 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.64□□□□□ -0.39
Nkx2-6P43688 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-6P43688 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-6P43688 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Nkx2-6P43688 Gm29608-201ENSMUST00000190444 463 ntBASIC12.64□□□□□ -0.39
Nkx2-6P43688 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.64□□□□□ -0.39
Nkx2-6P43688 Gm18054-201ENSMUST00000207539 555 ntBASIC12.64□□□□□ -0.39
Nkx2-6P43688 Gm6013-201ENSMUST00000212264 699 ntBASIC12.64□□□□□ -0.39
Nkx2-6P43688 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-6P43688 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-6P43688 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-6P43688 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.64□□□□□ -0.39
Nkx2-6P43688 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.64□□□□□ -0.39
Nkx2-6P43688 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-6P43688 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-6P43688 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-6P43688 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.64□□□□□ -0.39
Nkx2-6P43688 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-6P43688 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-6P43688 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-6P43688 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-6P43688 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Nkx2-6P43688 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-6P43688 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-6P43688 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-6P43688 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-6P43688 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-6P43688 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-6P43688 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Nkx2-6P43688 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Nkx2-6P43688 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-6P43688 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-6P43688 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.63□□□□□ -0.39
Nkx2-6P43688 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-6P43688 Gm37922-201ENSMUST00000195596 455 ntBASIC12.63□□□□□ -0.39
Nkx2-6P43688 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.63□□□□□ -0.39
Nkx2-6P43688 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-6P43688 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.63□□□□□ -0.39
Nkx2-6P43688 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Nkx2-6P43688 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Nkx2-6P43688 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Nkx2-6P43688 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.63□□□□□ -0.39
Nkx2-6P43688 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms