Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Sox6P40645 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox6P40645 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox6P40645 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox6P40645 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox6P40645 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.58□□□□□ -0.4
Sox6P40645 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox6P40645 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox6P40645 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sox6P40645 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Sox6P40645 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sox6P40645 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.58□□□□□ -0.4
Sox6P40645 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sox6P40645 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.58□□□□□ -0.4
Sox6P40645 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.58□□□□□ -0.4
Sox6P40645 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sox6P40645 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.58□□□□□ -0.4
Sox6P40645 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sox6P40645 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sox6P40645 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.58□□□□□ -0.4
Sox6P40645 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sox6P40645 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox6P40645 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Sox6P40645 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Sox6P40645 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox6P40645 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Sox6P40645 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox6P40645 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox6P40645 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox6P40645 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Sox6P40645 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox6P40645 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox6P40645 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sox6P40645 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox6P40645 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox6P40645 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox6P40645 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox6P40645 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox6P40645 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Sox6P40645 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox6P40645 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Sox6P40645 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox6P40645 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox6P40645 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Sox6P40645 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.57□□□□□ -0.4
Sox6P40645 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sox6P40645 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sox6P40645 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox6P40645 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Sox6P40645 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox6P40645 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox6P40645 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.57□□□□□ -0.4
Sox6P40645 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sox6P40645 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox6P40645 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox6P40645 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.57□□□□□ -0.4
Sox6P40645 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Sox6P40645 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox6P40645 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Sox6P40645 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sox6P40645 Gm15460-201ENSMUST00000118147 391 ntBASIC12.57□□□□□ -0.4
Sox6P40645 Gm27321-201ENSMUST00000185021 205 ntBASIC12.57□□□□□ -0.4
Sox6P40645 Gm10576-201ENSMUST00000191927 825 ntBASIC12.57□□□□□ -0.4
Sox6P40645 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sox6P40645 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.57□□□□□ -0.4
Sox6P40645 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.57□□□□□ -0.4
Sox6P40645 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.57□□□□□ -0.4
Sox6P40645 Gm18027-201ENSMUST00000218947 619 ntBASIC12.57□□□□□ -0.4
Sox6P40645 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox6P40645 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox6P40645 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox6P40645 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.57□□□□□ -0.4
Sox6P40645 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.57□□□□□ -0.4
Sox6P40645 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox6P40645 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Sox6P40645 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Sox6P40645 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sox6P40645 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox6P40645 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Sox6P40645 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox6P40645 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sox6P40645 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox6P40645 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Sox6P40645 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox6P40645 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox6P40645 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox6P40645 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Sox6P40645 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Sox6P40645 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox6P40645 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
Sox6P40645 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox6P40645 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sox6P40645 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox6P40645 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox6P40645 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox6P40645 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox6P40645 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sox6P40645 Rubie-203ENSMUST00000227803 2430 ntBASIC12.56□□□□□ -0.4
Sox6P40645 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.56□□□□□ -0.4
Sox6P40645 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms