Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cxcl12P40224 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cxcl12P40224 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cxcl12P40224 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.69□□□□□ -0.22
Cxcl12P40224 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cxcl12P40224 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Cxcl12P40224 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cxcl12P40224 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.69□□□□□ -0.22
Cxcl12P40224 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cxcl12P40224 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cxcl12P40224 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Cxcl12P40224 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cxcl12P40224 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cxcl12P40224 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cxcl12P40224 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
Cxcl12P40224 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cxcl12P40224 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cxcl12P40224 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cxcl12P40224 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cxcl12P40224 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl12P40224 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl12P40224 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl12P40224 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl12P40224 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC13.68□□□□□ -0.22
Cxcl12P40224 n-R5s14-201ENSMUST00000122688 107 ntBASIC13.68□□□□□ -0.22
Cxcl12P40224 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC13.68□□□□□ -0.22
Cxcl12P40224 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl12P40224 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC13.68□□□□□ -0.22
Cxcl12P40224 Gm25700-201ENSMUST00000177693 110 ntBASIC13.68□□□□□ -0.22
Cxcl12P40224 Gm7593-201ENSMUST00000187246 644 ntBASIC13.68□□□□□ -0.22
Cxcl12P40224 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC13.68□□□□□ -0.22
Cxcl12P40224 AC123665.1-201ENSMUST00000228204 438 ntBASIC13.68□□□□□ -0.22
Cxcl12P40224 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl12P40224 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl12P40224 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl12P40224 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cxcl12P40224 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.68□□□□□ -0.22
Cxcl12P40224 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl12P40224 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl12P40224 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl12P40224 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
Cxcl12P40224 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC13.68□□□□□ -0.22
Cxcl12P40224 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl12P40224 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl12P40224 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl12P40224 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cxcl12P40224 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl12P40224 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.67□□□□□ -0.22
Cxcl12P40224 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl12P40224 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC13.67□□□□□ -0.22
Cxcl12P40224 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl12P40224 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl12P40224 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl12P40224 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl12P40224 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Cxcl12P40224 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl12P40224 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl12P40224 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl12P40224 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl12P40224 Gm23200-201ENSMUST00000104379 132 ntBASIC13.67□□□□□ -0.22
Cxcl12P40224 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Cxcl12P40224 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Cxcl12P40224 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl12P40224 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.67□□□□□ -0.22
Cxcl12P40224 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13.67□□□□□ -0.22
Cxcl12P40224 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.67□□□□□ -0.22
Cxcl12P40224 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.67□□□□□ -0.22
Cxcl12P40224 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Cxcl12P40224 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl12P40224 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl12P40224 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl12P40224 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl12P40224 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl12P40224 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl12P40224 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl12P40224 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl12P40224 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.67□□□□□ -0.22
Cxcl12P40224 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl12P40224 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl12P40224 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl12P40224 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl12P40224 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cxcl12P40224 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl12P40224 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl12P40224 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl12P40224 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl12P40224 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl12P40224 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl12P40224 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Cxcl12P40224 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl12P40224 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Cxcl12P40224 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl12P40224 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl12P40224 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl12P40224 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl12P40224 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl12P40224 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl12P40224 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl12P40224 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cxcl12P40224 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms