Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Fen1P39749 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Fen1P39749 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Fen1P39749 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Fen1P39749 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Fen1P39749 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Fen1P39749 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Fen1P39749 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Fen1P39749 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Fen1P39749 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Fen1P39749 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Fen1P39749 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Fen1P39749 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC13.46□□□□□ -0.25
Fen1P39749 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.46□□□□□ -0.25
Fen1P39749 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Fen1P39749 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Fen1P39749 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Fen1P39749 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Fen1P39749 Gm13015-201ENSMUST00000118674 204 ntBASIC13.46□□□□□ -0.25
Fen1P39749 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.46□□□□□ -0.25
Fen1P39749 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Fen1P39749 Auts2-212ENSMUST00000178555 309 ntBASIC13.46□□□□□ -0.25
Fen1P39749 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Fen1P39749 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.46□□□□□ -0.25
Fen1P39749 Gm44719-201ENSMUST00000206404 149 ntBASIC13.46□□□□□ -0.25
Fen1P39749 Gm45612-201ENSMUST00000211320 160 ntBASIC13.46□□□□□ -0.25
Fen1P39749 Gm8396-201ENSMUST00000057361 823 ntBASIC13.46□□□□□ -0.25
Fen1P39749 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Fen1P39749 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Fen1P39749 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Fen1P39749 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Fen1P39749 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
Fen1P39749 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Fen1P39749 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Fen1P39749 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Fen1P39749 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Fen1P39749 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Fen1P39749 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fen1P39749 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.45□□□□□ -0.26
Fen1P39749 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
Fen1P39749 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fen1P39749 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
Fen1P39749 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fen1P39749 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fen1P39749 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fen1P39749 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fen1P39749 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Fen1P39749 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.45□□□□□ -0.26
Fen1P39749 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fen1P39749 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fen1P39749 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fen1P39749 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fen1P39749 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fen1P39749 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Fen1P39749 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.45□□□□□ -0.26
Fen1P39749 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fen1P39749 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.45□□□□□ -0.26
Fen1P39749 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.45□□□□□ -0.26
Fen1P39749 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.45□□□□□ -0.26
Fen1P39749 Gm44872-201ENSMUST00000207864 420 ntBASIC13.45□□□□□ -0.26
Fen1P39749 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.45□□□□□ -0.26
Fen1P39749 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fen1P39749 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fen1P39749 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fen1P39749 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fen1P39749 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fen1P39749 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fen1P39749 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.45□□□□□ -0.26
Fen1P39749 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Fen1P39749 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fen1P39749 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fen1P39749 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.45□□□□□ -0.26
Fen1P39749 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Fen1P39749 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fen1P39749 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Fen1P39749 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fen1P39749 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fen1P39749 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Fen1P39749 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fen1P39749 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Fen1P39749 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
Fen1P39749 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Fen1P39749 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Fen1P39749 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Fen1P39749 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
Fen1P39749 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
Fen1P39749 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Fen1P39749 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.44□□□□□ -0.26
Fen1P39749 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Fen1P39749 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Fen1P39749 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.44□□□□□ -0.26
Fen1P39749 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Fen1P39749 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Fen1P39749 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Fen1P39749 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Fen1P39749 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Fen1P39749 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Fen1P39749 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Fen1P39749 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Fen1P39749 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms