Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.34□□□□□ -0.27
LdlrP35951 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LdlrP35951 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.34□□□□□ -0.27
LdlrP35951 Gm6912-201ENSMUST00000117218 544 ntBASIC13.34□□□□□ -0.27
LdlrP35951 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LdlrP35951 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.34□□□□□ -0.27
LdlrP35951 Gm8515-201ENSMUST00000194852 576 ntBASIC13.34□□□□□ -0.27
LdlrP35951 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LdlrP35951 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.34□□□□□ -0.27
LdlrP35951 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LdlrP35951 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.34□□□□□ -0.27
LdlrP35951 Shd-206ENSMUST00000225145 998 ntBASIC13.34□□□□□ -0.27
LdlrP35951 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LdlrP35951 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LdlrP35951 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LdlrP35951 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LdlrP35951 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LdlrP35951 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LdlrP35951 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LdlrP35951 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LdlrP35951 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LdlrP35951 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LdlrP35951 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.34□□□□□ -0.27
LdlrP35951 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LdlrP35951 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LdlrP35951 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
LdlrP35951 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
LdlrP35951 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
LdlrP35951 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.34□□□□□ -0.27
LdlrP35951 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
LdlrP35951 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.33□□□□□ -0.27
LdlrP35951 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
LdlrP35951 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
LdlrP35951 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
LdlrP35951 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
LdlrP35951 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
LdlrP35951 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
LdlrP35951 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
LdlrP35951 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.33□□□□□ -0.27
LdlrP35951 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LdlrP35951 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LdlrP35951 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LdlrP35951 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
LdlrP35951 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
LdlrP35951 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LdlrP35951 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LdlrP35951 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
LdlrP35951 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LdlrP35951 Gm15678-201ENSMUST00000117573 960 ntBASIC13.33□□□□□ -0.28
LdlrP35951 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LdlrP35951 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.33□□□□□ -0.28
LdlrP35951 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.33□□□□□ -0.28
LdlrP35951 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.33□□□□□ -0.28
LdlrP35951 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LdlrP35951 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
LdlrP35951 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.33□□□□□ -0.28
LdlrP35951 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
LdlrP35951 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LdlrP35951 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LdlrP35951 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.33□□□□□ -0.28
LdlrP35951 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LdlrP35951 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.33□□□□□ -0.28
LdlrP35951 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.33□□□□□ -0.28
LdlrP35951 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
LdlrP35951 Gm6180-201ENSMUST00000065243 498 ntBASIC13.33□□□□□ -0.28
LdlrP35951 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
LdlrP35951 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LdlrP35951 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LdlrP35951 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LdlrP35951 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
LdlrP35951 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LdlrP35951 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
LdlrP35951 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LdlrP35951 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LdlrP35951 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LdlrP35951 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.32□□□□□ -0.28
LdlrP35951 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LdlrP35951 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LdlrP35951 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LdlrP35951 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
LdlrP35951 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
LdlrP35951 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LdlrP35951 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LdlrP35951 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LdlrP35951 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC13.32□□□□□ -0.28
LdlrP35951 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LdlrP35951 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
LdlrP35951 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.32□□□□□ -0.28
LdlrP35951 Gm6745-201ENSMUST00000199216 526 ntBASIC13.32□□□□□ -0.28
LdlrP35951 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.32□□□□□ -0.28
LdlrP35951 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
LdlrP35951 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LdlrP35951 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LdlrP35951 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LdlrP35951 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LdlrP35951 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LdlrP35951 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
LdlrP35951 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LdlrP35951 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.32□□□□□ -0.28
LdlrP35951 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms