Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Mmp13P33435 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.72□□□□□ -0.21
Mmp13P33435 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Mmp13P33435 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Mmp13P33435 Gm2423-201ENSMUST00000074863 733 ntBASIC13.72□□□□□ -0.21
Mmp13P33435 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Mmp13P33435 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Mmp13P33435 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Mmp13P33435 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Mmp13P33435 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Mmp13P33435 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Mmp13P33435 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Mmp13P33435 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Mmp13P33435 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Mmp13P33435 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Mmp13P33435 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Mmp13P33435 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Mmp13P33435 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Mmp13P33435 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Mmp13P33435 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Mmp13P33435 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Mmp13P33435 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Mmp13P33435 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp13P33435 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.71□□□□□ -0.21
Mmp13P33435 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp13P33435 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Mmp13P33435 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Mmp13P33435 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp13P33435 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp13P33435 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Mmp13P33435 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
Mmp13P33435 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp13P33435 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp13P33435 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp13P33435 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp13P33435 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp13P33435 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.71□□□□□ -0.21
Mmp13P33435 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.71□□□□□ -0.21
Mmp13P33435 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.71□□□□□ -0.21
Mmp13P33435 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.71□□□□□ -0.21
Mmp13P33435 Gm8927-201ENSMUST00000181978 981 ntBASIC13.71□□□□□ -0.21
Mmp13P33435 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.71□□□□□ -0.21
Mmp13P33435 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.71□□□□□ -0.21
Mmp13P33435 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.71□□□□□ -0.21
Mmp13P33435 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp13P33435 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp13P33435 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Mmp13P33435 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Mmp13P33435 Gm3222-201ENSMUST00000071282 990 ntBASIC13.71□□□□□ -0.21
Mmp13P33435 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp13P33435 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp13P33435 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Mmp13P33435 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.71□□□□□ -0.21
Mmp13P33435 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp13P33435 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp13P33435 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp13P33435 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp13P33435 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Mmp13P33435 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Mmp13P33435 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Mmp13P33435 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Mmp13P33435 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Mmp13P33435 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Mmp13P33435 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Mmp13P33435 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Mmp13P33435 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.71□□□□□ -0.22
Mmp13P33435 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp13P33435 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp13P33435 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp13P33435 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp13P33435 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp13P33435 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp13P33435 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp13P33435 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.7□□□□□ -0.22
Mmp13P33435 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp13P33435 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp13P33435 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp13P33435 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp13P33435 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp13P33435 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp13P33435 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp13P33435 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp13P33435 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Mmp13P33435 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.7□□□□□ -0.22
Mmp13P33435 Gm21470-201ENSMUST00000187680 696 ntBASIC13.7□□□□□ -0.22
Mmp13P33435 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.7□□□□□ -0.22
Mmp13P33435 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp13P33435 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp13P33435 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp13P33435 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp13P33435 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp13P33435 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp13P33435 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp13P33435 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp13P33435 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp13P33435 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp13P33435 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Mmp13P33435 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.7□□□□□ -0.22
Mmp13P33435 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Mmp13P33435 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms