Protein–RNA interactions for Protein: P29788

Vtn, Vitronectin, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VtnP29788 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.14□□□□□ -0.47
VtnP29788 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.14□□□□□ -0.47
VtnP29788 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.14□□□□□ -0.47
VtnP29788 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
VtnP29788 Gm12403-201ENSMUST00000121384 959 ntBASIC12.14□□□□□ -0.47
VtnP29788 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.14□□□□□ -0.47
VtnP29788 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.14□□□□□ -0.47
VtnP29788 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.14□□□□□ -0.47
VtnP29788 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.14□□□□□ -0.47
VtnP29788 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.14□□□□□ -0.47
VtnP29788 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.14□□□□□ -0.47
VtnP29788 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
VtnP29788 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.14□□□□□ -0.47
VtnP29788 Gm42550-201ENSMUST00000201553 960 ntBASIC12.14□□□□□ -0.47
VtnP29788 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VtnP29788 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VtnP29788 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
VtnP29788 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
VtnP29788 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VtnP29788 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VtnP29788 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
VtnP29788 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
VtnP29788 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
VtnP29788 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
VtnP29788 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
VtnP29788 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VtnP29788 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
VtnP29788 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VtnP29788 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
VtnP29788 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
VtnP29788 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
VtnP29788 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.13□□□□□ -0.47
VtnP29788 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.13□□□□□ -0.47
VtnP29788 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
VtnP29788 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VtnP29788 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VtnP29788 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
VtnP29788 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.13□□□□□ -0.47
VtnP29788 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
VtnP29788 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.13□□□□□ -0.47
VtnP29788 Gm11425-201ENSMUST00000119608 498 ntBASIC12.13□□□□□ -0.47
VtnP29788 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VtnP29788 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
VtnP29788 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.13□□□□□ -0.47
VtnP29788 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
VtnP29788 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
VtnP29788 Gm29608-201ENSMUST00000190444 463 ntBASIC12.13□□□□□ -0.47
VtnP29788 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.13□□□□□ -0.47
VtnP29788 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VtnP29788 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
VtnP29788 Gm9396-201ENSMUST00000076703 567 ntBASIC12.13□□□□□ -0.47
VtnP29788 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
VtnP29788 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
VtnP29788 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VtnP29788 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
VtnP29788 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VtnP29788 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VtnP29788 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.13□□□□□ -0.47
VtnP29788 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
VtnP29788 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
VtnP29788 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VtnP29788 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VtnP29788 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
VtnP29788 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
VtnP29788 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.12□□□□□ -0.47
VtnP29788 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
VtnP29788 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
VtnP29788 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.12□□□□□ -0.47
VtnP29788 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.12□□□□□ -0.47
VtnP29788 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.12□□□□□ -0.47
VtnP29788 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
VtnP29788 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
VtnP29788 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
VtnP29788 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
VtnP29788 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
VtnP29788 Gm27892-201ENSMUST00000185017 106 ntBASIC12.12□□□□□ -0.47
VtnP29788 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
VtnP29788 Gm38223-201ENSMUST00000194484 695 ntBASIC12.12□□□□□ -0.47
VtnP29788 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
VtnP29788 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.12□□□□□ -0.47
VtnP29788 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.12□□□□□ -0.47
VtnP29788 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.12□□□□□ -0.47
VtnP29788 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
VtnP29788 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
VtnP29788 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
VtnP29788 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
VtnP29788 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
VtnP29788 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
VtnP29788 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
VtnP29788 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.12□□□□□ -0.47
VtnP29788 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
VtnP29788 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
VtnP29788 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
VtnP29788 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
VtnP29788 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
VtnP29788 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
VtnP29788 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VtnP29788 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VtnP29788 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
VtnP29788 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms