Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vcam1P29533 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vcam1P29533 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Vcam1P29533 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vcam1P29533 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vcam1P29533 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vcam1P29533 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vcam1P29533 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Vcam1P29533 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Vcam1P29533 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vcam1P29533 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vcam1P29533 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC15.29■□□□□ 0.04
Vcam1P29533 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vcam1P29533 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC15.29■□□□□ 0.04
Vcam1P29533 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Vcam1P29533 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vcam1P29533 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vcam1P29533 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC15.29■□□□□ 0.04
Vcam1P29533 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC15.29■□□□□ 0.04
Vcam1P29533 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vcam1P29533 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vcam1P29533 Gm5637-201ENSMUST00000153890 1119 ntBASIC15.29■□□□□ 0.04
Vcam1P29533 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC15.29■□□□□ 0.04
Vcam1P29533 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Vcam1P29533 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Vcam1P29533 Gm22121-201ENSMUST00000175148 54 ntBASIC15.29■□□□□ 0.04
Vcam1P29533 Mospd4-201ENSMUST00000180618 576 ntBASIC15.29■□□□□ 0.04
Vcam1P29533 Gm38297-201ENSMUST00000195122 1057 ntBASIC15.29■□□□□ 0.04
Vcam1P29533 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vcam1P29533 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vcam1P29533 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Vcam1P29533 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vcam1P29533 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Vcam1P29533 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vcam1P29533 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Vcam1P29533 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vcam1P29533 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vcam1P29533 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vcam1P29533 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vcam1P29533 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC15.29■□□□□ 0.04
Vcam1P29533 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vcam1P29533 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vcam1P29533 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vcam1P29533 Gm38157-201ENSMUST00000194178 1698 ntBASIC15.28■□□□□ 0.04
Vcam1P29533 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vcam1P29533 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vcam1P29533 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vcam1P29533 Gm15897-201ENSMUST00000117770 1486 ntBASIC15.28■□□□□ 0.04
Vcam1P29533 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC15.28■□□□□ 0.04
Vcam1P29533 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vcam1P29533 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Vcam1P29533 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Vcam1P29533 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vcam1P29533 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Vcam1P29533 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC15.28■□□□□ 0.04
Vcam1P29533 Gm8738-201ENSMUST00000172606 329 ntBASIC15.28■□□□□ 0.04
Vcam1P29533 AC166051.1-201ENSMUST00000214313 210 ntBASIC15.28■□□□□ 0.04
Vcam1P29533 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vcam1P29533 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vcam1P29533 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vcam1P29533 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vcam1P29533 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Vcam1P29533 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vcam1P29533 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vcam1P29533 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vcam1P29533 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vcam1P29533 CT009713.10-201ENSMUST00000225013 1986 ntBASIC15.27■□□□□ 0.04
Vcam1P29533 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vcam1P29533 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vcam1P29533 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vcam1P29533 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vcam1P29533 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vcam1P29533 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vcam1P29533 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Vcam1P29533 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vcam1P29533 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vcam1P29533 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vcam1P29533 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vcam1P29533 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vcam1P29533 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vcam1P29533 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vcam1P29533 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Vcam1P29533 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC15.27■□□□□ 0.04
Vcam1P29533 Gm4986-201ENSMUST00000119731 549 ntBASIC15.27■□□□□ 0.04
Vcam1P29533 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC15.27■□□□□ 0.04
Vcam1P29533 Gm13316-201ENSMUST00000140537 691 ntBASIC15.27■□□□□ 0.04
Vcam1P29533 Mir7221-201ENSMUST00000184009 72 ntBASIC15.27■□□□□ 0.04
Vcam1P29533 Gm4857-201ENSMUST00000192718 785 ntBASIC15.27■□□□□ 0.04
Vcam1P29533 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC15.27■□□□□ 0.04
Vcam1P29533 AC069562.3-201ENSMUST00000225387 587 ntBASIC15.27■□□□□ 0.04
Vcam1P29533 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Vcam1P29533 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vcam1P29533 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vcam1P29533 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Vcam1P29533 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vcam1P29533 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
Vcam1P29533 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vcam1P29533 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Vcam1P29533 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vcam1P29533 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms