Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Mmp3P28862 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Mmp3P28862 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Mmp3P28862 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Mmp3P28862 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Mmp3P28862 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Mmp3P28862 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Mmp3P28862 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Mmp3P28862 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Mmp3P28862 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Mmp3P28862 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Mmp3P28862 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Mmp3P28862 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC14.27□□□□□ -0.12
Mmp3P28862 Gm12329-201ENSMUST00000120829 1007 ntBASIC14.27□□□□□ -0.13
Mmp3P28862 Gm11978-201ENSMUST00000122315 466 ntBASIC14.27□□□□□ -0.13
Mmp3P28862 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC14.27□□□□□ -0.13
Mmp3P28862 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Mmp3P28862 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC14.27□□□□□ -0.13
Mmp3P28862 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC14.27□□□□□ -0.13
Mmp3P28862 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Mmp3P28862 Gm27501-201ENSMUST00000183599 107 ntBASIC14.27□□□□□ -0.13
Mmp3P28862 Mir8109-201ENSMUST00000184375 117 ntBASIC14.27□□□□□ -0.13
Mmp3P28862 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mmp3P28862 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mmp3P28862 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mmp3P28862 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mmp3P28862 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Mmp3P28862 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Mmp3P28862 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mmp3P28862 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Mmp3P28862 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp3P28862 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC14.26□□□□□ -0.13
Mmp3P28862 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp3P28862 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp3P28862 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp3P28862 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp3P28862 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Mmp3P28862 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp3P28862 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp3P28862 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp3P28862 Gm11793-201ENSMUST00000120433 981 ntBASIC14.26□□□□□ -0.13
Mmp3P28862 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC14.26□□□□□ -0.13
Mmp3P28862 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp3P28862 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp3P28862 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Mmp3P28862 Gm27516-201ENSMUST00000184237 98 ntBASIC14.26□□□□□ -0.13
Mmp3P28862 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC14.26□□□□□ -0.13
Mmp3P28862 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC14.26□□□□□ -0.13
Mmp3P28862 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC14.26□□□□□ -0.13
Mmp3P28862 AC154462.2-201ENSMUST00000227519 370 ntBASIC14.26□□□□□ -0.13
Mmp3P28862 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp3P28862 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp3P28862 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp3P28862 n-R5s195-201ENSMUST00000082891 119 ntBASIC14.26□□□□□ -0.13
Mmp3P28862 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp3P28862 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp3P28862 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp3P28862 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp3P28862 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp3P28862 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp3P28862 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp3P28862 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp3P28862 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp3P28862 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp3P28862 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC14.26□□□□□ -0.13
Mmp3P28862 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.26□□□□□ -0.13
Mmp3P28862 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp3P28862 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp3P28862 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Mmp3P28862 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp3P28862 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp3P28862 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.25□□□□□ -0.13
Mmp3P28862 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp3P28862 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp3P28862 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.25□□□□□ -0.13
Mmp3P28862 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp3P28862 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp3P28862 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp3P28862 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp3P28862 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp3P28862 Gm43579-201ENSMUST00000202387 1307 ntBASIC14.25□□□□□ -0.13
Mmp3P28862 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp3P28862 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp3P28862 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp3P28862 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp3P28862 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Mmp3P28862 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC14.25□□□□□ -0.13
Mmp3P28862 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp3P28862 Gm6161-201ENSMUST00000121942 1102 ntBASIC14.25□□□□□ -0.13
Mmp3P28862 Gm12363-201ENSMUST00000122250 668 ntBASIC14.25□□□□□ -0.13
Mmp3P28862 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp3P28862 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Mmp3P28862 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC14.25□□□□□ -0.13
Mmp3P28862 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC14.25□□□□□ -0.13
Mmp3P28862 Gm26185-201ENSMUST00000157692 266 ntBASIC14.25□□□□□ -0.13
Mmp3P28862 Gm16379-201ENSMUST00000161469 348 ntBASIC14.25□□□□□ -0.13
Mmp3P28862 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Mmp3P28862 Gm6254-201ENSMUST00000168178 1072 ntBASIC14.25□□□□□ -0.13
Mmp3P28862 Gm6153-201ENSMUST00000172004 1058 ntBASIC14.25□□□□□ -0.13
Mmp3P28862 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms