Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nckap1P28660 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nckap1P28660 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nckap1P28660 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.32□□□□□ -0.28
Nckap1P28660 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Nckap1P28660 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Nckap1P28660 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nckap1P28660 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nckap1P28660 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nckap1P28660 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nckap1P28660 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nckap1P28660 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nckap1P28660 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Nckap1P28660 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nckap1P28660 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Nckap1P28660 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nckap1P28660 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nckap1P28660 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Nckap1P28660 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nckap1P28660 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.31□□□□□ -0.28
Nckap1P28660 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nckap1P28660 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nckap1P28660 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nckap1P28660 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nckap1P28660 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.31□□□□□ -0.28
Nckap1P28660 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nckap1P28660 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nckap1P28660 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.31□□□□□ -0.28
Nckap1P28660 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nckap1P28660 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nckap1P28660 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nckap1P28660 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nckap1P28660 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nckap1P28660 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nckap1P28660 Gm5187-201ENSMUST00000117317 991 ntBASIC13.31□□□□□ -0.28
Nckap1P28660 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Nckap1P28660 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Nckap1P28660 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Nckap1P28660 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Nckap1P28660 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC13.31□□□□□ -0.28
Nckap1P28660 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nckap1P28660 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nckap1P28660 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Nckap1P28660 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nckap1P28660 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nckap1P28660 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nckap1P28660 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.31□□□□□ -0.28
Nckap1P28660 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.31□□□□□ -0.28
Nckap1P28660 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nckap1P28660 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Nckap1P28660 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Nckap1P28660 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nckap1P28660 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nckap1P28660 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nckap1P28660 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nckap1P28660 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.31□□□□□ -0.28
Nckap1P28660 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.31□□□□□ -0.28
Nckap1P28660 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nckap1P28660 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Nckap1P28660 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nckap1P28660 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nckap1P28660 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nckap1P28660 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nckap1P28660 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nckap1P28660 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nckap1P28660 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nckap1P28660 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nckap1P28660 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nckap1P28660 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nckap1P28660 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Nckap1P28660 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nckap1P28660 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nckap1P28660 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Nckap1P28660 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Nckap1P28660 Gm11618-201ENSMUST00000117946 267 ntBASIC13.3□□□□□ -0.28
Nckap1P28660 Gm13369-201ENSMUST00000119442 987 ntBASIC13.3□□□□□ -0.28
Nckap1P28660 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC13.3□□□□□ -0.28
Nckap1P28660 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Nckap1P28660 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC13.3□□□□□ -0.28
Nckap1P28660 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nckap1P28660 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Nckap1P28660 Gm27514-201ENSMUST00000183692 110 ntBASIC13.3□□□□□ -0.28
Nckap1P28660 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nckap1P28660 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC13.3□□□□□ -0.28
Nckap1P28660 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nckap1P28660 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nckap1P28660 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nckap1P28660 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nckap1P28660 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nckap1P28660 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.3□□□□□ -0.28
Nckap1P28660 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nckap1P28660 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nckap1P28660 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nckap1P28660 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Nckap1P28660 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nckap1P28660 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Nckap1P28660 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.3□□□□□ -0.28
Nckap1P28660 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nckap1P28660 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Nckap1P28660 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms