Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cd40lgP27548 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cd40lgP27548 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Cd40lgP27548 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cd40lgP27548 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cd40lgP27548 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cd40lgP27548 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cd40lgP27548 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cd40lgP27548 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cd40lgP27548 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Cd40lgP27548 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.37□□□□□ -0.43
Cd40lgP27548 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cd40lgP27548 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cd40lgP27548 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.37□□□□□ -0.43
Cd40lgP27548 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Cd40lgP27548 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Cd40lgP27548 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.37□□□□□ -0.43
Cd40lgP27548 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cd40lgP27548 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.37□□□□□ -0.43
Cd40lgP27548 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cd40lgP27548 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cd40lgP27548 Mir497b-201ENSMUST00000093601 125 ntBASIC12.37□□□□□ -0.43
Cd40lgP27548 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cd40lgP27548 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cd40lgP27548 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Cd40lgP27548 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cd40lgP27548 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cd40lgP27548 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Cd40lgP27548 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cd40lgP27548 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cd40lgP27548 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Cd40lgP27548 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cd40lgP27548 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cd40lgP27548 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cd40lgP27548 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cd40lgP27548 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12.37□□□□□ -0.43
Cd40lgP27548 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cd40lgP27548 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cd40lgP27548 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cd40lgP27548 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.36□□□□□ -0.43
Cd40lgP27548 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cd40lgP27548 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cd40lgP27548 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cd40lgP27548 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.36□□□□□ -0.43
Cd40lgP27548 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cd40lgP27548 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cd40lgP27548 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cd40lgP27548 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cd40lgP27548 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cd40lgP27548 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cd40lgP27548 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Cd40lgP27548 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Cd40lgP27548 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cd40lgP27548 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cd40lgP27548 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.36□□□□□ -0.43
Cd40lgP27548 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.36□□□□□ -0.43
Cd40lgP27548 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.36□□□□□ -0.43
Cd40lgP27548 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cd40lgP27548 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.36□□□□□ -0.43
Cd40lgP27548 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Cd40lgP27548 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Cd40lgP27548 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.36□□□□□ -0.43
Cd40lgP27548 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cd40lgP27548 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cd40lgP27548 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.36□□□□□ -0.43
Cd40lgP27548 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Cd40lgP27548 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cd40lgP27548 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cd40lgP27548 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.36□□□□□ -0.43
Cd40lgP27548 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cd40lgP27548 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cd40lgP27548 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.36□□□□□ -0.43
Cd40lgP27548 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.36□□□□□ -0.43
Cd40lgP27548 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cd40lgP27548 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cd40lgP27548 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cd40lgP27548 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cd40lgP27548 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cd40lgP27548 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Cd40lgP27548 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.35□□□□□ -0.43
Cd40lgP27548 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cd40lgP27548 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cd40lgP27548 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cd40lgP27548 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cd40lgP27548 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cd40lgP27548 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cd40lgP27548 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cd40lgP27548 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cd40lgP27548 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.35□□□□□ -0.43
Cd40lgP27548 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Cd40lgP27548 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cd40lgP27548 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Cd40lgP27548 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cd40lgP27548 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cd40lgP27548 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cd40lgP27548 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cd40lgP27548 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.35□□□□□ -0.43
Cd40lgP27548 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cd40lgP27548 Gm11424-201ENSMUST00000121929 829 ntBASIC12.35□□□□□ -0.43
Cd40lgP27548 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms