Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cntn1P12960 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cntn1P12960 Gm10012-201ENSMUST00000078252 192 ntBASIC12.84□□□□□ -0.35
Cntn1P12960 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Cntn1P12960 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cntn1P12960 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.84□□□□□ -0.35
Cntn1P12960 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cntn1P12960 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cntn1P12960 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Cntn1P12960 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Cntn1P12960 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cntn1P12960 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cntn1P12960 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.84□□□□□ -0.35
Cntn1P12960 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cntn1P12960 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cntn1P12960 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cntn1P12960 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Cntn1P12960 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Cntn1P12960 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Cntn1P12960 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.83□□□□□ -0.35
Cntn1P12960 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Cntn1P12960 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Cntn1P12960 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cntn1P12960 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cntn1P12960 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cntn1P12960 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cntn1P12960 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cntn1P12960 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cntn1P12960 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cntn1P12960 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC12.83□□□□□ -0.36
Cntn1P12960 Gm5687-201ENSMUST00000118252 640 ntBASIC12.83□□□□□ -0.36
Cntn1P12960 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.83□□□□□ -0.36
Cntn1P12960 Gm11803-201ENSMUST00000119966 444 ntBASIC12.83□□□□□ -0.36
Cntn1P12960 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cntn1P12960 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cntn1P12960 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.83□□□□□ -0.36
Cntn1P12960 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.83□□□□□ -0.36
Cntn1P12960 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cntn1P12960 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.83□□□□□ -0.36
Cntn1P12960 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cntn1P12960 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cntn1P12960 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Cntn1P12960 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cntn1P12960 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.83□□□□□ -0.36
Cntn1P12960 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Cntn1P12960 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Cntn1P12960 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.83□□□□□ -0.36
Cntn1P12960 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Cntn1P12960 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Cntn1P12960 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Cntn1P12960 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cntn1P12960 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cntn1P12960 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cntn1P12960 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cntn1P12960 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cntn1P12960 Gm10040-201ENSMUST00000080726 1662 ntBASIC12.83□□□□□ -0.36
Cntn1P12960 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cntn1P12960 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.83□□□□□ -0.36
Cntn1P12960 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Cntn1P12960 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cntn1P12960 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cntn1P12960 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn1P12960 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn1P12960 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn1P12960 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn1P12960 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn1P12960 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn1P12960 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Cntn1P12960 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.82□□□□□ -0.36
Cntn1P12960 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn1P12960 Gm38197-201ENSMUST00000192320 2122 ntBASIC12.82□□□□□ -0.36
Cntn1P12960 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn1P12960 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn1P12960 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn1P12960 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn1P12960 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn1P12960 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn1P12960 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn1P12960 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Cntn1P12960 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.82□□□□□ -0.36
Cntn1P12960 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.82□□□□□ -0.36
Cntn1P12960 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn1P12960 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn1P12960 Proscos-202ENSMUST00000178990 666 ntBASIC12.82□□□□□ -0.36
Cntn1P12960 Gm24196-201ENSMUST00000179161 110 ntBASIC12.82□□□□□ -0.36
Cntn1P12960 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.82□□□□□ -0.36
Cntn1P12960 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn1P12960 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.82□□□□□ -0.36
Cntn1P12960 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.82□□□□□ -0.36
Cntn1P12960 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.82□□□□□ -0.36
Cntn1P12960 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Cntn1P12960 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.82□□□□□ -0.36
Cntn1P12960 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn1P12960 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn1P12960 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn1P12960 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn1P12960 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn1P12960 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn1P12960 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cntn1P12960 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms