Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.08□□□□□ -0.64
Cxcl1P12850 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC11.08□□□□□ -0.64
Cxcl1P12850 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC11.08□□□□□ -0.64
Cxcl1P12850 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl1P12850 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl1P12850 Gm46209-201ENSMUST00000217912 553 ntBASIC11.08□□□□□ -0.64
Cxcl1P12850 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
Cxcl1P12850 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl1P12850 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl1P12850 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl1P12850 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl1P12850 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl1P12850 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl1P12850 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl1P12850 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl1P12850 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl1P12850 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl1P12850 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.08□□□□□ -0.64
Cxcl1P12850 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl1P12850 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl1P12850 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Cxcl1P12850 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl1P12850 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl1P12850 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC11.08□□□□□ -0.64
Cxcl1P12850 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl1P12850 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
Cxcl1P12850 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl1P12850 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl1P12850 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl1P12850 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl1P12850 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl1P12850 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl1P12850 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl1P12850 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cxcl1P12850 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcl1P12850 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcl1P12850 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcl1P12850 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcl1P12850 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Cxcl1P12850 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcl1P12850 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcl1P12850 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.07□□□□□ -0.64
Cxcl1P12850 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcl1P12850 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcl1P12850 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcl1P12850 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcl1P12850 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Cxcl1P12850 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcl1P12850 Gm12585-201ENSMUST00000117307 290 ntBASIC11.07□□□□□ -0.64
Cxcl1P12850 Gm6415-201ENSMUST00000118488 348 ntBASIC11.07□□□□□ -0.64
Cxcl1P12850 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
Cxcl1P12850 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcl1P12850 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcl1P12850 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC11.07□□□□□ -0.64
Cxcl1P12850 Gm27741-201ENSMUST00000185060 237 ntBASIC11.07□□□□□ -0.64
Cxcl1P12850 Gm10253-201ENSMUST00000194270 940 ntBASIC11.07□□□□□ -0.64
Cxcl1P12850 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC11.07□□□□□ -0.64
Cxcl1P12850 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcl1P12850 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC11.07□□□□□ -0.64
Cxcl1P12850 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC11.07□□□□□ -0.64
Cxcl1P12850 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcl1P12850 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcl1P12850 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Cxcl1P12850 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcl1P12850 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcl1P12850 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcl1P12850 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcl1P12850 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcl1P12850 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcl1P12850 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcl1P12850 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcl1P12850 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcl1P12850 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcl1P12850 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcl1P12850 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcl1P12850 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cxcl1P12850 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Cxcl1P12850 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.06□□□□□ -0.64
Cxcl1P12850 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcl1P12850 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcl1P12850 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcl1P12850 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcl1P12850 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcl1P12850 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Cxcl1P12850 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcl1P12850 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Cxcl1P12850 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcl1P12850 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcl1P12850 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcl1P12850 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcl1P12850 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.06□□□□□ -0.64
Cxcl1P12850 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcl1P12850 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcl1P12850 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcl1P12850 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcl1P12850 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Cxcl1P12850 Gm8410-201ENSMUST00000117225 605 ntBASIC11.06□□□□□ -0.64
Cxcl1P12850 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Cxcl1P12850 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Cxcl1P12850 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms