Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC15.46■□□□□ 0.07
Col1a1P11087 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Col1a1P11087 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
Col1a1P11087 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC15.46■□□□□ 0.07
Col1a1P11087 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Col1a1P11087 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Col1a1P11087 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.46■□□□□ 0.07
Col1a1P11087 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Col1a1P11087 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Col1a1P11087 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Col1a1P11087 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Col1a1P11087 Gm23200-201ENSMUST00000104379 132 ntBASIC15.46■□□□□ 0.06
Col1a1P11087 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
Col1a1P11087 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Col1a1P11087 Gm11331-201ENSMUST00000119764 288 ntBASIC15.46■□□□□ 0.06
Col1a1P11087 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
Col1a1P11087 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC15.46■□□□□ 0.06
Col1a1P11087 Gm44262-201ENSMUST00000204969 372 ntBASIC15.46■□□□□ 0.06
Col1a1P11087 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Col1a1P11087 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Col1a1P11087 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Col1a1P11087 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col1a1P11087 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col1a1P11087 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Col1a1P11087 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Col1a1P11087 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col1a1P11087 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col1a1P11087 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC15.45■□□□□ 0.06
Col1a1P11087 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col1a1P11087 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col1a1P11087 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Col1a1P11087 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col1a1P11087 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC15.45■□□□□ 0.06
Col1a1P11087 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col1a1P11087 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col1a1P11087 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col1a1P11087 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col1a1P11087 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Col1a1P11087 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Col1a1P11087 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC15.45■□□□□ 0.06
Col1a1P11087 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC15.45■□□□□ 0.06
Col1a1P11087 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC15.45■□□□□ 0.06
Col1a1P11087 Gm25700-201ENSMUST00000177693 110 ntBASIC15.45■□□□□ 0.06
Col1a1P11087 Gm8546-201ENSMUST00000178288 1264 ntBASIC15.45■□□□□ 0.06
Col1a1P11087 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Col1a1P11087 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC15.45■□□□□ 0.06
Col1a1P11087 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC15.45■□□□□ 0.06
Col1a1P11087 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Col1a1P11087 Gm22058-201ENSMUST00000083393 310 ntBASIC15.45■□□□□ 0.06
Col1a1P11087 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Col1a1P11087 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Col1a1P11087 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Col1a1P11087 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Col1a1P11087 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col1a1P11087 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col1a1P11087 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Col1a1P11087 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col1a1P11087 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Col1a1P11087 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col1a1P11087 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Col1a1P11087 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Col1a1P11087 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC15.44■□□□□ 0.06
Col1a1P11087 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC15.44■□□□□ 0.06
Col1a1P11087 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Col1a1P11087 Gm43416-201ENSMUST00000201916 1015 ntBASIC15.44■□□□□ 0.06
Col1a1P11087 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC15.44■□□□□ 0.06
Col1a1P11087 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC15.44■□□□□ 0.06
Col1a1P11087 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col1a1P11087 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col1a1P11087 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col1a1P11087 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Col1a1P11087 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col1a1P11087 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Col1a1P11087 Gm10702-201ENSMUST00000098929 1268 ntBASIC15.44■□□□□ 0.06
Col1a1P11087 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Col1a1P11087 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col1a1P11087 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Col1a1P11087 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Col1a1P11087 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Col1a1P11087 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Col1a1P11087 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC15.44■□□□□ 0.06
Col1a1P11087 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col1a1P11087 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col1a1P11087 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col1a1P11087 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col1a1P11087 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col1a1P11087 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col1a1P11087 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC15.43■□□□□ 0.06
Col1a1P11087 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC15.43■□□□□ 0.06
Col1a1P11087 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Col1a1P11087 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC15.43■□□□□ 0.06
Col1a1P11087 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Col1a1P11087 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col1a1P11087 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col1a1P11087 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col1a1P11087 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Col1a1P11087 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC15.43■□□□□ 0.06
Col1a1P11087 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Col1a1P11087 Gm27023-201ENSMUST00000182372 285 ntBASIC15.43■□□□□ 0.06
Col1a1P11087 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms