Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Chmp6P0C0A3 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp6P0C0A3 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Chmp6P0C0A3 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Chmp6P0C0A3 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp6P0C0A3 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp6P0C0A3 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp6P0C0A3 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp6P0C0A3 Gm12485-201ENSMUST00000119641 291 ntBASIC14.59□□□□□ -0.07
Chmp6P0C0A3 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.59□□□□□ -0.07
Chmp6P0C0A3 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp6P0C0A3 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.59□□□□□ -0.07
Chmp6P0C0A3 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.59□□□□□ -0.07
Chmp6P0C0A3 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.59□□□□□ -0.07
Chmp6P0C0A3 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp6P0C0A3 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp6P0C0A3 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp6P0C0A3 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp6P0C0A3 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Chmp6P0C0A3 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Chmp6P0C0A3 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Chmp6P0C0A3 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp6P0C0A3 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Chmp6P0C0A3 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp6P0C0A3 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Chmp6P0C0A3 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Chmp6P0C0A3 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Chmp6P0C0A3 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Chmp6P0C0A3 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Chmp6P0C0A3 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Chmp6P0C0A3 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.07
Chmp6P0C0A3 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp6P0C0A3 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp6P0C0A3 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.58□□□□□ -0.08
Chmp6P0C0A3 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Chmp6P0C0A3 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp6P0C0A3 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp6P0C0A3 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp6P0C0A3 Gm12341-201ENSMUST00000119724 503 ntBASIC14.58□□□□□ -0.08
Chmp6P0C0A3 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.58□□□□□ -0.08
Chmp6P0C0A3 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.58□□□□□ -0.08
Chmp6P0C0A3 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp6P0C0A3 Gm6745-201ENSMUST00000199216 526 ntBASIC14.58□□□□□ -0.08
Chmp6P0C0A3 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.58□□□□□ -0.08
Chmp6P0C0A3 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.58□□□□□ -0.08
Chmp6P0C0A3 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.58□□□□□ -0.08
Chmp6P0C0A3 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.58□□□□□ -0.08
Chmp6P0C0A3 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp6P0C0A3 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp6P0C0A3 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.58□□□□□ -0.08
Chmp6P0C0A3 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp6P0C0A3 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC14.58□□□□□ -0.08
Chmp6P0C0A3 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp6P0C0A3 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp6P0C0A3 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp6P0C0A3 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp6P0C0A3 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp6P0C0A3 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.58□□□□□ -0.08
Chmp6P0C0A3 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp6P0C0A3 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp6P0C0A3 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp6P0C0A3 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.58□□□□□ -0.08
Chmp6P0C0A3 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp6P0C0A3 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Chmp6P0C0A3 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp6P0C0A3 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Chmp6P0C0A3 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.57□□□□□ -0.08
Chmp6P0C0A3 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp6P0C0A3 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp6P0C0A3 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Chmp6P0C0A3 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.57□□□□□ -0.08
Chmp6P0C0A3 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp6P0C0A3 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp6P0C0A3 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp6P0C0A3 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC14.57□□□□□ -0.08
Chmp6P0C0A3 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp6P0C0A3 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp6P0C0A3 Gm15770-201ENSMUST00000117498 584 ntBASIC14.57□□□□□ -0.08
Chmp6P0C0A3 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.57□□□□□ -0.08
Chmp6P0C0A3 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp6P0C0A3 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp6P0C0A3 Gm18018-201ENSMUST00000198273 408 ntBASIC14.57□□□□□ -0.08
Chmp6P0C0A3 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.57□□□□□ -0.08
Chmp6P0C0A3 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp6P0C0A3 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp6P0C0A3 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.57□□□□□ -0.08
Chmp6P0C0A3 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Chmp6P0C0A3 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp6P0C0A3 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
Chmp6P0C0A3 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp6P0C0A3 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.57□□□□□ -0.08
Chmp6P0C0A3 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.56□□□□□ -0.08
Chmp6P0C0A3 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp6P0C0A3 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp6P0C0A3 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Chmp6P0C0A3 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp6P0C0A3 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp6P0C0A3 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp6P0C0A3 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp6P0C0A3 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms