Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col4a2P08122 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col4a2P08122 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col4a2P08122 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col4a2P08122 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col4a2P08122 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.21□□□□□ -0.45
Col4a2P08122 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Col4a2P08122 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.21□□□□□ -0.45
Col4a2P08122 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col4a2P08122 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.21□□□□□ -0.45
Col4a2P08122 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Col4a2P08122 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.21□□□□□ -0.45
Col4a2P08122 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col4a2P08122 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.21□□□□□ -0.45
Col4a2P08122 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Col4a2P08122 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Col4a2P08122 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col4a2P08122 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col4a2P08122 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col4a2P08122 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col4a2P08122 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Col4a2P08122 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col4a2P08122 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col4a2P08122 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Col4a2P08122 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Col4a2P08122 Matn2-206ENSMUST00000228570 2798 ntBASIC12.21□□□□□ -0.46
Col4a2P08122 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Col4a2P08122 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a2P08122 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a2P08122 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.2□□□□□ -0.46
Col4a2P08122 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a2P08122 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a2P08122 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Col4a2P08122 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a2P08122 Gm22902-201ENSMUST00000158488 302 ntBASIC12.2□□□□□ -0.46
Col4a2P08122 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.2□□□□□ -0.46
Col4a2P08122 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Col4a2P08122 Gm26956-201ENSMUST00000182176 986 ntBASIC12.2□□□□□ -0.46
Col4a2P08122 Gm37986-201ENSMUST00000193285 383 ntBASIC12.2□□□□□ -0.46
Col4a2P08122 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a2P08122 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.2□□□□□ -0.46
Col4a2P08122 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a2P08122 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a2P08122 Gm10702-201ENSMUST00000098929 1268 ntBASIC12.2□□□□□ -0.46
Col4a2P08122 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a2P08122 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a2P08122 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a2P08122 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a2P08122 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a2P08122 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Col4a2P08122 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.2□□□□□ -0.46
Col4a2P08122 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a2P08122 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.2□□□□□ -0.46
Col4a2P08122 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.2□□□□□ -0.46
Col4a2P08122 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Col4a2P08122 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a2P08122 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a2P08122 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a2P08122 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Col4a2P08122 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.2□□□□□ -0.46
Col4a2P08122 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.2□□□□□ -0.46
Col4a2P08122 Gm14277-201ENSMUST00000121195 360 ntBASIC12.2□□□□□ -0.46
Col4a2P08122 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Col4a2P08122 Gm22334-201ENSMUST00000158070 133 ntBASIC12.2□□□□□ -0.46
Col4a2P08122 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.2□□□□□ -0.46
Col4a2P08122 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.2□□□□□ -0.46
Col4a2P08122 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Col4a2P08122 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.2□□□□□ -0.46
Col4a2P08122 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.2□□□□□ -0.46
Col4a2P08122 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a2P08122 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a2P08122 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a2P08122 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a2P08122 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a2P08122 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Col4a2P08122 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Col4a2P08122 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a2P08122 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a2P08122 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a2P08122 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a2P08122 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a2P08122 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.19□□□□□ -0.46
Col4a2P08122 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a2P08122 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a2P08122 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a2P08122 Gm17208-201ENSMUST00000168388 535 ntBASIC12.19□□□□□ -0.46
Col4a2P08122 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a2P08122 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.19□□□□□ -0.46
Col4a2P08122 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.19□□□□□ -0.46
Col4a2P08122 Gm18212-201ENSMUST00000211678 889 ntBASIC12.19□□□□□ -0.46
Col4a2P08122 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.19□□□□□ -0.46
Col4a2P08122 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.19□□□□□ -0.46
Col4a2P08122 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a2P08122 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a2P08122 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a2P08122 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a2P08122 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC12.19□□□□□ -0.46
Col4a2P08122 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a2P08122 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Col4a2P08122 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms